Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2537

Experiment: Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol%
3,169,859	-				-0.1
3,169,864	+				-0.1
3,169,900	-				-1.7
3,169,900	-				-0.1
3,169,941	+		BT2535	0.21	-0.5
3,169,955	+		BT2535	0.25	-0.1
3,169,955	+		BT2535	0.25	-0.1
3,169,968	+		BT2535	0.29	-2.1
3,169,969	-		BT2535	0.29	-1.6
3,169,978	-		BT2535	0.32	-0.1
3,169,978	-		BT2535	0.32	-2.0
3,170,013	+		BT2535	0.42	-1.1
3,170,041	-		BT2535	0.51	-0.1
3,170,042	+		BT2535	0.51	-4.5
3,170,042	+		BT2535	0.51	-1.7
3,170,043	-		BT2535	0.51	+0.3
3,170,050	-		BT2535	0.53	-0.4
3,170,050	-		BT2535	0.53	+0.3
3,170,064	+		BT2535	0.57	+0.1
3,170,119	+		BT2535	0.74	-1.7
3,170,131	+		BT2535	0.77	-1.2
3,170,131	+		BT2535	0.77	-0.1
3,170,131	+		BT2535	0.77	+1.3
3,170,131	+		BT2535	0.77	-1.3
3,170,131	+		BT2535	0.77	-2.7
3,170,132	-		BT2535	0.78	-1.5
3,170,132	-		BT2535	0.78	-1.9
3,170,134	+		BT2535	0.78	+0.3
3,170,195	-				+0.9
3,170,197	+				-1.1
3,170,229	+				-0.4
3,170,234	-				-0.9
3,170,268	-				+0.8
3,170,309	-				-1.2
3,170,309	-				-2.0
3,170,309	-				-1.1
3,170,357	+		BT2536	0.19	-0.4
3,170,358	-		BT2536	0.20	-0.5
3,170,374	+		BT2536	0.23	-2.6
3,170,375	-		BT2536	0.23	-1.7
3,170,375	-		BT2536	0.23	-2.9
3,170,376	+		BT2536	0.23	-0.7
3,170,376	+		BT2536	0.23	-0.2
3,170,443	+		BT2536	0.37	-1.7
3,170,444	-		BT2536	0.37	-1.9
3,170,455	+		BT2536	0.39	-0.6
3,170,490	+		BT2536	0.47	-1.1
3,170,491	-		BT2536	0.47	-0.9
3,170,549	-		BT2536	0.59	+1.2
3,170,549	-		BT2536	0.59	-1.7
3,170,578	+		BT2536	0.65	-1.7
3,170,605	+		BT2536	0.70	-0.3
3,170,606	-		BT2536	0.70	-0.8
3,170,624	-		BT2536	0.74	+0.3
3,170,664	+		BT2536	0.82	+1.2
3,170,694	+		BT2536	0.88	-0.4
3,170,706	-				-0.4
3,170,709	+				-1.6
3,170,710	-				-0.1
3,170,710	-				-1.7
3,170,710	-				-0.1
3,170,720	+				-1.7
3,170,721	-				-0.7
3,170,782	+				-1.1
3,170,782	+				-0.1
3,170,783	-				-2.0
3,170,843	+				-0.6
3,170,844	-				-1.3
3,170,844	-				-1.5
3,170,846	-				-1.2
3,170,847	+				-0.1
3,170,847	+				-1.8
3,170,848	-				-1.9
3,170,853	+				-1.4
3,170,858	-				-2.5
3,170,858	-				-0.7
3,170,945	-		BT2537	0.23	-1.5
3,170,981	+		BT2537	0.33	-3.8
3,170,981	+		BT2537	0.33	-0.1
3,171,044	+		BT2537	0.49	-0.5
3,171,044	+		BT2537	0.49	-1.4
3,171,045	-		BT2537	0.49	-1.7
3,171,047	+		BT2537	0.50	-2.1
3,171,057	+		BT2537	0.52	-2.4
3,171,058	-		BT2537	0.53	-2.1
3,171,217	-				-0.1
3,171,225	+				-1.1
3,171,244	+				-0.3
3,171,244	+				-1.8
3,171,244	+				-2.1
3,171,245	-				+1.9
3,171,245	-				-1.9
3,171,273	-				-0.7
3,171,361	+				-2.1
3,171,369	+				-2.9
3,171,369	+				-0.1
3,171,370	-				-2.1
3,171,375	+				-0.1
3,171,375	+				-0.1
3,171,380	+				-1.2
3,171,508	+				-1.1
3,171,512	+				-1.5
3,171,513	-				-1.8
3,171,587	+				-1.4
3,171,588	-				-2.9
3,171,591	+				-2.5
3,171,646	+		BT2538	0.14	-1.1
3,171,669	-		BT2538	0.19	-1.4
3,171,770	+		BT2538	0.40	-1.1
3,171,771	-		BT2538	0.40	-3.0
3,171,771	-		BT2538	0.40	-1.3
3,171,913	-		BT2538	0.69	+0.5
3,171,995	+		BT2538	0.86	-1.0
3,171,996	-		BT2538	0.86	-0.1
3,171,996	-		BT2538	0.86	-1.5
3,172,057	+				-1.0
3,172,137	+				+1.5
3,172,175	+				-3.1