Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1981

Experiment: Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol%
2,491,325	+		BT1980	0.51	+0.2
2,491,337	-		BT1980	0.52	+0.0
2,491,434	+		BT1980	0.58	+0.2
2,491,533	+		BT1980	0.64	-1.0
2,491,534	-		BT1980	0.64	+0.0
2,491,539	+		BT1980	0.64	+0.0
2,491,603	-		BT1980	0.68	+0.0
2,491,634	+		BT1980	0.70	-3.1
2,491,655	+		BT1980	0.71	-1.6
2,491,656	-		BT1980	0.71	-2.3
2,491,712	+		BT1980	0.75	-2.6
2,491,712	+		BT1980	0.75	+0.0
2,491,775	+		BT1980	0.78	-1.6
2,491,775	+		BT1980	0.78	+0.0
2,491,776	-		BT1980	0.79	-3.1
2,491,781	-		BT1980	0.79	-3.1
2,491,985	+				+0.0
2,492,014	+				-2.0
2,492,045	+				-1.2
2,492,051	+				-3.3
2,492,057	+				+1.0
2,492,107	+				-2.0
2,492,108	+				-1.0
2,492,153	-				-1.6
2,492,159	+				-0.9
2,492,427	+		BT1981	0.60	-0.6
2,492,427	+		BT1981	0.60	-1.0
2,492,428	-		BT1981	0.60	+1.0
2,492,431	-		BT1981	0.61	-1.2
2,492,431	-		BT1981	0.61	-3.7
2,492,482	+		BT1981	0.78	-5.1
2,492,537	-				-1.6
2,492,553	+				-1.0
2,492,604	+		BT1982	0.18	+0.6
2,492,607	+		BT1982	0.18	-1.7
2,492,724	+		BT1982	0.54	-0.4
2,492,726	+		BT1982	0.55	+0.0
2,492,727	-		BT1982	0.55	+0.0
2,492,937	+				-4.4
2,492,937	+				-2.6
2,492,938	-				-2.3
2,492,979	+		BT1983	0.15	-6.8
2,492,982	-		BT1983	0.15	-2.8
2,493,062	+		BT1983	0.27	-3.3
2,493,094	+		BT1983	0.31	-2.0
2,493,113	-		BT1983	0.34	-3.0
2,493,171	+		BT1983	0.42	-2.0
2,493,176	-		BT1983	0.43	-3.4
2,493,176	-		BT1983	0.43	-4.1
2,493,196	+		BT1983	0.46	-3.1
2,493,340	+		BT1983	0.67	-4.1
2,493,343	-		BT1983	0.67	-1.0
2,493,344	+		BT1983	0.68	+0.0
2,493,348	+		BT1983	0.68	-1.6
2,493,349	-		BT1983	0.68	-2.3
2,493,349	-		BT1983	0.68	-4.7
2,493,451	+		BT1983	0.83	+0.0
2,493,454	-		BT1983	0.83	+1.0
2,493,473	-		BT1983	0.86	-1.0
2,493,490	+		BT1983	0.89	-2.3
2,493,490	+		BT1983	0.89	-6.2
2,493,492	+		BT1983	0.89	-3.9
2,493,492	+		BT1983	0.89	-2.8
2,493,492	+		BT1983	0.89	-1.6
2,493,493	-		BT1983	0.89	-2.3
2,493,493	-		BT1983	0.89	-4.0
2,493,493	-		BT1983	0.89	-4.8
2,493,493	-		BT1983	0.89	+0.0
2,493,493	-				-2.6
2,493,534	-				-2.3
2,493,541	-				-1.0