Experiment: MoYLS4 media with N2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2728 and DvMF_2729 are separated by 79 nucleotides DvMF_2729 and DvMF_2730 are separated by 91 nucleotides DvMF_2730 and DvMF_2731 are separated by 179 nucleotides
DvMF_2728: DvMF_2728 - magnesium chelatase ChlI subunit (RefSeq), at 3,452,644 to 3,453,618
_2728
DvMF_2729: DvMF_2729 - hypothetical protein (RefSeq), at 3,453,698 to 3,454,342
_2729
DvMF_2730: DvMF_2730 - hypothetical protein (RefSeq), at 3,454,434 to 3,454,952
_2730
DvMF_2731: DvMF_2731 - PAS/PAC sensor hybrid histidine kinase (RefSeq), at 3,455,132 to 3,458,155
_2731
Position (kb)
3453
3454
3455 Strain fitness (log2 ratio)
-1
0
1 at 3452.814 kb on + strand, within DvMF_2728 at 3452.814 kb on + strand, within DvMF_2728 at 3453.289 kb on - strand, within DvMF_2728 at 3453.388 kb on - strand, within DvMF_2728 at 3453.558 kb on - strand at 3453.588 kb on - strand at 3453.625 kb on + strand at 3453.633 kb on - strand at 3453.759 kb on - strand at 3453.807 kb on - strand, within DvMF_2729 at 3454.031 kb on + strand, within DvMF_2729 at 3454.044 kb on - strand, within DvMF_2729 at 3454.062 kb on + strand, within DvMF_2729 at 3454.062 kb on + strand, within DvMF_2729 at 3454.118 kb on + strand, within DvMF_2729 at 3454.126 kb on - strand, within DvMF_2729 at 3454.300 kb on + strand at 3454.319 kb on + strand at 3454.340 kb on - strand at 3454.813 kb on + strand, within DvMF_2730 at 3454.996 kb on - strand at 3455.030 kb on - strand at 3455.180 kb on - strand at 3455.196 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media with N2 remove 3,452,814 + DvMF_2728 0.17 -0.1 3,452,814 + DvMF_2728 0.17 -0.0 3,453,289 - DvMF_2728 0.66 +0.1 3,453,388 - DvMF_2728 0.76 -0.3 3,453,558 - -0.7 3,453,588 - +0.2 3,453,625 + -0.1 3,453,633 - +0.2 3,453,759 - -0.3 3,453,807 - DvMF_2729 0.17 -0.2 3,454,031 + DvMF_2729 0.52 -0.6 3,454,044 - DvMF_2729 0.54 -0.3 3,454,062 + DvMF_2729 0.56 +0.5 3,454,062 + DvMF_2729 0.56 -0.2 3,454,118 + DvMF_2729 0.65 -0.3 3,454,126 - DvMF_2729 0.66 -0.1 3,454,300 + -0.3 3,454,319 + -0.6 3,454,340 - +0.0 3,454,813 + DvMF_2730 0.73 +0.4 3,454,996 - -0.2 3,455,030 - -0.4 3,455,180 - -0.0 3,455,196 + -0.1
Or see this region's nucleotide sequence