Experiment: MoYLS4 media with N2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2600 and DvMF_2601 are separated by 256 nucleotides DvMF_2601 and DvMF_2602 overlap by 4 nucleotides
DvMF_2600: DvMF_2600 - beta-lactamase domain protein (RefSeq), at 3,284,950 to 3,285,975
_2600
DvMF_2601: DvMF_2601 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 3,286,232 to 3,287,632
_2601
DvMF_2602: DvMF_2602 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 3,287,629 to 3,290,469
_2602
Position (kb)
3286
3287
3288 Strain fitness (log2 ratio)
-1
0
1 at 3285.266 kb on - strand, within DvMF_2600 at 3285.448 kb on - strand, within DvMF_2600 at 3285.482 kb on + strand, within DvMF_2600 at 3285.625 kb on + strand, within DvMF_2600 at 3285.628 kb on - strand, within DvMF_2600 at 3285.750 kb on + strand, within DvMF_2600 at 3285.759 kb on + strand, within DvMF_2600 at 3285.999 kb on - strand at 3286.090 kb on + strand at 3286.346 kb on - strand at 3286.408 kb on + strand, within DvMF_2601 at 3286.422 kb on - strand, within DvMF_2601 at 3286.630 kb on - strand, within DvMF_2601 at 3286.656 kb on - strand, within DvMF_2601 at 3286.897 kb on + strand, within DvMF_2601 at 3286.965 kb on + strand, within DvMF_2601 at 3286.973 kb on - strand, within DvMF_2601 at 3286.973 kb on - strand, within DvMF_2601 at 3286.973 kb on - strand, within DvMF_2601 at 3287.121 kb on + strand, within DvMF_2601 at 3287.129 kb on - strand, within DvMF_2601 at 3287.129 kb on - strand, within DvMF_2601 at 3287.254 kb on - strand, within DvMF_2601 at 3287.290 kb on + strand, within DvMF_2601 at 3287.484 kb on + strand, within DvMF_2601 at 3287.506 kb on - strand at 3287.636 kb on - strand at 3287.643 kb on - strand at 3287.694 kb on + strand at 3287.985 kb on + strand, within DvMF_2602 at 3288.087 kb on + strand, within DvMF_2602 at 3288.587 kb on + strand, within DvMF_2602 at 3288.627 kb on - strand, within DvMF_2602
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media with N2 remove 3,285,266 - DvMF_2600 0.31 -0.0 3,285,448 - DvMF_2600 0.49 -0.2 3,285,482 + DvMF_2600 0.52 -0.0 3,285,625 + DvMF_2600 0.66 -0.3 3,285,628 - DvMF_2600 0.66 -0.8 3,285,750 + DvMF_2600 0.78 -0.4 3,285,759 + DvMF_2600 0.79 -0.1 3,285,999 - -0.3 3,286,090 + -0.3 3,286,346 - -0.2 3,286,408 + DvMF_2601 0.13 +0.3 3,286,422 - DvMF_2601 0.14 -0.2 3,286,630 - DvMF_2601 0.28 -0.0 3,286,656 - DvMF_2601 0.30 -0.1 3,286,897 + DvMF_2601 0.47 +0.2 3,286,965 + DvMF_2601 0.52 +0.2 3,286,973 - DvMF_2601 0.53 -0.1 3,286,973 - DvMF_2601 0.53 +0.3 3,286,973 - DvMF_2601 0.53 -0.0 3,287,121 + DvMF_2601 0.63 -0.1 3,287,129 - DvMF_2601 0.64 +0.2 3,287,129 - DvMF_2601 0.64 +0.5 3,287,254 - DvMF_2601 0.73 +0.1 3,287,290 + DvMF_2601 0.76 +0.5 3,287,484 + DvMF_2601 0.89 -0.2 3,287,506 - -0.6 3,287,636 - +0.2 3,287,643 - -0.2 3,287,694 + +0.1 3,287,985 + DvMF_2602 0.13 -0.2 3,288,087 + DvMF_2602 0.16 +0.1 3,288,587 + DvMF_2602 0.34 -1.2 3,288,627 - DvMF_2602 0.35 -0.2
Or see this region's nucleotide sequence