Experiment: MoYLS4 media with N2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2572 and DvMF_2573 overlap by 1 nucleotides DvMF_2573 and DvMF_2574 overlap by 4 nucleotides
DvMF_2572: DvMF_2572 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 3,251,081 to 3,252,637
_2572
DvMF_2573: DvMF_2573 - PAS/PAC sensor signal transduction histidine kinase (RefSeq), at 3,252,637 to 3,254,838
_2573
DvMF_2574: DvMF_2574 - Osmosensitive K channel His kinase sensor (RefSeq), at 3,254,835 to 3,255,962
_2574
Position (kb)
3252
3253
3254
3255 Strain fitness (log2 ratio)
-1
0
1 at 3252.011 kb on - strand, within DvMF_2572 at 3252.190 kb on + strand, within DvMF_2572 at 3252.597 kb on + strand at 3252.637 kb on - strand at 3252.646 kb on - strand at 3252.845 kb on - strand at 3252.855 kb on - strand at 3253.027 kb on - strand, within DvMF_2573 at 3253.200 kb on + strand, within DvMF_2573 at 3253.247 kb on - strand, within DvMF_2573 at 3253.262 kb on - strand, within DvMF_2573 at 3253.517 kb on + strand, within DvMF_2573 at 3253.696 kb on + strand, within DvMF_2573 at 3253.699 kb on - strand, within DvMF_2573 at 3253.709 kb on - strand, within DvMF_2573 at 3253.736 kb on + strand, within DvMF_2573 at 3253.771 kb on + strand, within DvMF_2573 at 3253.870 kb on - strand, within DvMF_2573 at 3254.612 kb on - strand, within DvMF_2573 at 3254.718 kb on + strand at 3254.828 kb on - strand at 3254.873 kb on + strand at 3255.022 kb on - strand, within DvMF_2574 at 3255.355 kb on - strand, within DvMF_2574 at 3255.392 kb on - strand, within DvMF_2574 at 3255.461 kb on + strand, within DvMF_2574 at 3255.721 kb on - strand, within DvMF_2574 at 3255.761 kb on + strand, within DvMF_2574 at 3255.761 kb on + strand, within DvMF_2574 at 3255.761 kb on + strand, within DvMF_2574
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media with N2 remove 3,252,011 - DvMF_2572 0.60 +0.1 3,252,190 + DvMF_2572 0.71 +0.1 3,252,597 + +0.3 3,252,637 - -0.9 3,252,646 - -0.1 3,252,845 - +0.1 3,252,855 - -0.9 3,253,027 - DvMF_2573 0.18 -0.5 3,253,200 + DvMF_2573 0.26 +0.2 3,253,247 - DvMF_2573 0.28 -0.4 3,253,262 - DvMF_2573 0.28 -0.3 3,253,517 + DvMF_2573 0.40 -0.4 3,253,696 + DvMF_2573 0.48 -0.3 3,253,699 - DvMF_2573 0.48 -0.6 3,253,709 - DvMF_2573 0.49 -0.6 3,253,736 + DvMF_2573 0.50 -0.4 3,253,771 + DvMF_2573 0.51 -1.5 3,253,870 - DvMF_2573 0.56 -1.3 3,254,612 - DvMF_2573 0.90 -1.0 3,254,718 + +0.6 3,254,828 - +0.1 3,254,873 + -0.3 3,255,022 - DvMF_2574 0.17 -0.2 3,255,355 - DvMF_2574 0.46 -0.4 3,255,392 - DvMF_2574 0.49 -0.1 3,255,461 + DvMF_2574 0.55 -0.4 3,255,721 - DvMF_2574 0.79 -0.5 3,255,761 + DvMF_2574 0.82 -0.4 3,255,761 + DvMF_2574 0.82 -0.6 3,255,761 + DvMF_2574 0.82 -0.6
Or see this region's nucleotide sequence