Experiment: Pyruvate-Sulfite (60-20mM) with Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0643 and DVU0645 are separated by 442 nucleotides DVU0645 and cobI are separated by 209 nucleotides cobI and DVU0647 are separated by 1 nucleotides
DVU0643: DVU0643 - thiF protein, putative (TIGR), at 713,537 to 714,376
DVU0643
DVU0645: DVU0645 - methyl-accepting chemotaxis protein (TIGR), at 714,819 to 716,858
DVU0645
DVU0646: cobI - precorrin-2 C20-methyltransferase (TIGR), at 717,068 to 717,838
cobI
DVU0647: DVU0647 - iron compound ABC transporter, periplasmic iron compount-binding protein, putative (TIGR), at 717,840 to 718,754
DVU0647
Position (kb) 714
715
716
717 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 713.917 kb on - strand, within DVU0643 at 713.956 kb on + strand, within DVU0643 at 713.968 kb on + strand, within DVU0643 at 713.992 kb on + strand, within DVU0643 at 714.012 kb on + strand, within DVU0643 at 714.079 kb on - strand, within DVU0643 at 714.108 kb on - strand, within DVU0643 at 714.132 kb on - strand, within DVU0643 at 714.157 kb on + strand, within DVU0643 at 714.203 kb on + strand, within DVU0643 at 714.245 kb on + strand, within DVU0643 at 714.251 kb on - strand, within DVU0643 at 714.268 kb on + strand, within DVU0643 at 714.276 kb on - strand, within DVU0643 at 714.365 kb on + strand at 714.365 kb on + strand at 714.368 kb on - strand at 714.404 kb on - strand at 714.417 kb on + strand at 714.441 kb on + strand at 714.441 kb on + strand at 714.441 kb on + strand at 714.449 kb on - strand at 714.482 kb on - strand at 714.492 kb on - strand at 714.618 kb on - strand at 714.632 kb on - strand at 714.674 kb on + strand at 714.909 kb on - strand at 714.976 kb on - strand at 715.069 kb on - strand, within DVU0645 at 715.085 kb on + strand, within DVU0645 at 715.261 kb on + strand, within DVU0645 at 715.293 kb on + strand, within DVU0645 at 715.349 kb on + strand, within DVU0645 at 715.352 kb on + strand, within DVU0645 at 715.357 kb on - strand, within DVU0645 at 715.397 kb on - strand, within DVU0645 at 715.407 kb on - strand, within DVU0645 at 715.427 kb on - strand, within DVU0645 at 715.460 kb on - strand, within DVU0645 at 715.486 kb on + strand, within DVU0645 at 715.494 kb on - strand, within DVU0645 at 715.535 kb on + strand, within DVU0645 at 715.609 kb on + strand, within DVU0645 at 715.624 kb on + strand, within DVU0645 at 715.627 kb on - strand, within DVU0645 at 715.695 kb on + strand, within DVU0645 at 715.851 kb on + strand, within DVU0645 at 715.859 kb on - strand, within DVU0645 at 715.862 kb on - strand, within DVU0645 at 715.901 kb on + strand, within DVU0645 at 715.907 kb on - strand, within DVU0645 at 715.909 kb on - strand, within DVU0645 at 715.979 kb on + strand, within DVU0645 at 715.979 kb on + strand, within DVU0645 at 716.006 kb on + strand, within DVU0645 at 716.031 kb on - strand, within DVU0645 at 716.072 kb on - strand, within DVU0645 at 716.098 kb on + strand, within DVU0645 at 716.106 kb on - strand, within DVU0645 at 716.117 kb on + strand, within DVU0645 at 716.190 kb on - strand, within DVU0645 at 716.193 kb on - strand, within DVU0645 at 716.249 kb on - strand, within DVU0645 at 716.267 kb on - strand, within DVU0645 at 716.325 kb on - strand, within DVU0645 at 716.356 kb on - strand, within DVU0645 at 716.475 kb on - strand, within DVU0645 at 716.527 kb on + strand, within DVU0645 at 716.529 kb on + strand, within DVU0645 at 716.568 kb on - strand, within DVU0645 at 716.586 kb on - strand, within DVU0645 at 716.601 kb on - strand, within DVU0645 at 716.669 kb on - strand at 716.672 kb on + strand at 716.689 kb on + strand at 716.689 kb on + strand at 716.842 kb on + strand at 716.860 kb on - strand at 716.860 kb on - strand at 716.909 kb on - strand at 716.998 kb on + strand at 717.022 kb on + strand at 717.073 kb on - strand at 717.157 kb on + strand, within cobI at 717.165 kb on - strand, within cobI at 717.264 kb on - strand, within cobI at 717.342 kb on + strand, within cobI at 717.406 kb on + strand, within cobI at 717.414 kb on - strand, within cobI at 717.480 kb on - strand, within cobI at 717.519 kb on + strand, within cobI at 717.628 kb on + strand, within cobI at 717.687 kb on - strand, within cobI at 717.711 kb on - strand, within cobI at 717.758 kb on - strand, within cobI at 717.761 kb on + strand, within cobI at 717.763 kb on - strand at 717.769 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Tungstate 2mM remove 713,917 - DVU0643 0.45 +0.0 713,956 + DVU0643 0.50 -1.3 713,968 + DVU0643 0.51 -0.9 713,992 + DVU0643 0.54 +0.4 714,012 + DVU0643 0.57 -1.3 714,079 - DVU0643 0.65 -1.2 714,108 - DVU0643 0.68 -1.8 714,132 - DVU0643 0.71 -0.8 714,157 + DVU0643 0.74 +0.5 714,203 + DVU0643 0.79 +0.3 714,245 + DVU0643 0.84 +1.7 714,251 - DVU0643 0.85 -0.3 714,268 + DVU0643 0.87 -0.7 714,276 - DVU0643 0.88 +0.4 714,365 + -1.3 714,365 + +0.7 714,368 - -1.0 714,404 - -0.2 714,417 + -0.6 714,441 + -1.9 714,441 + -0.9 714,441 + -0.7 714,449 - -1.9 714,482 - +1.1 714,492 - -0.2 714,618 - +0.3 714,632 - -0.8 714,674 + -1.9 714,909 - -1.0 714,976 - -2.3 715,069 - DVU0645 0.12 -0.9 715,085 + DVU0645 0.13 -1.7 715,261 + DVU0645 0.22 -1.0 715,293 + DVU0645 0.23 -0.1 715,349 + DVU0645 0.26 +0.5 715,352 + DVU0645 0.26 -2.7 715,357 - DVU0645 0.26 -0.6 715,397 - DVU0645 0.28 +2.7 715,407 - DVU0645 0.29 -1.2 715,427 - DVU0645 0.30 -1.5 715,460 - DVU0645 0.31 +1.0 715,486 + DVU0645 0.33 -2.2 715,494 - DVU0645 0.33 -1.6 715,535 + DVU0645 0.35 -2.6 715,609 + DVU0645 0.39 -2.5 715,624 + DVU0645 0.39 -1.1 715,627 - DVU0645 0.40 -2.0 715,695 + DVU0645 0.43 -0.9 715,851 + DVU0645 0.51 +0.6 715,859 - DVU0645 0.51 +3.2 715,862 - DVU0645 0.51 -1.8 715,901 + DVU0645 0.53 -2.3 715,907 - DVU0645 0.53 -1.3 715,909 - DVU0645 0.53 -1.4 715,979 + DVU0645 0.57 -0.1 715,979 + DVU0645 0.57 -0.3 716,006 + DVU0645 0.58 +1.6 716,031 - DVU0645 0.59 -2.2 716,072 - DVU0645 0.61 +0.2 716,098 + DVU0645 0.63 -0.8 716,106 - DVU0645 0.63 +0.7 716,117 + DVU0645 0.64 -0.3 716,190 - DVU0645 0.67 -1.6 716,193 - DVU0645 0.67 -1.0 716,249 - DVU0645 0.70 +1.4 716,267 - DVU0645 0.71 -1.4 716,325 - DVU0645 0.74 -0.7 716,356 - DVU0645 0.75 -0.7 716,475 - DVU0645 0.81 -3.0 716,527 + DVU0645 0.84 -1.9 716,529 + DVU0645 0.84 -0.7 716,568 - DVU0645 0.86 -1.4 716,586 - DVU0645 0.87 -1.0 716,601 - DVU0645 0.87 +1.3 716,669 - -1.3 716,672 + +0.1 716,689 + -1.4 716,689 + -2.3 716,842 + -2.5 716,860 - +0.5 716,860 - -0.2 716,909 - -1.6 716,998 + -1.3 717,022 + +0.1 717,073 - +1.9 717,157 + cobI DVU0646 0.12 -0.8 717,165 - cobI DVU0646 0.13 -2.4 717,264 - cobI DVU0646 0.25 +1.7 717,342 + cobI DVU0646 0.36 -2.6 717,406 + cobI DVU0646 0.44 +0.7 717,414 - cobI DVU0646 0.45 +3.4 717,480 - cobI DVU0646 0.53 -0.2 717,519 + cobI DVU0646 0.58 +0.7 717,628 + cobI DVU0646 0.73 -1.9 717,687 - cobI DVU0646 0.80 -0.0 717,711 - cobI DVU0646 0.83 -1.2 717,758 - cobI DVU0646 0.89 +2.2 717,761 + cobI DVU0646 0.90 -2.1 717,763 - +1.6 717,769 - -1.0
Or see this region's nucleotide sequence