Experiment: Pyruvate-Sulfite (60-20mM) with Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt pabA and DVU0365 overlap by 4 nucleotides DVU0365 and DVU0366 overlap by 10 nucleotides
DVU0364: pabA - para-aminobenzoate/anthranilate synthase glutamine amidotransferase (TIGR), at 413,780 to 414,334
pabA
DVU0365: DVU0365 - conserved hypothetical protein (TIGR), at 414,331 to 415,086
DVU0365
DVU0366: DVU0366 - 5-formyltetrahydrofolate cyclo-ligase family protein (TIGR), at 415,077 to 415,928
DVU0366
Position (kb) 414
415
416 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 413.430 kb on - strand at 413.523 kb on - strand at 413.531 kb on - strand at 413.549 kb on - strand at 413.570 kb on + strand at 413.577 kb on + strand at 413.578 kb on - strand at 413.578 kb on - strand at 413.587 kb on - strand at 413.641 kb on + strand at 413.680 kb on + strand at 413.709 kb on - strand at 413.719 kb on - strand at 413.755 kb on + strand at 413.796 kb on - strand at 413.811 kb on - strand at 413.858 kb on - strand, within pabA at 413.935 kb on + strand, within pabA at 413.964 kb on + strand, within pabA at 413.977 kb on - strand, within pabA at 413.990 kb on - strand, within pabA at 414.007 kb on - strand, within pabA at 414.012 kb on + strand, within pabA at 414.018 kb on + strand, within pabA at 414.020 kb on - strand, within pabA at 414.103 kb on + strand, within pabA at 414.149 kb on - strand, within pabA at 414.186 kb on - strand, within pabA at 414.224 kb on + strand, within pabA at 414.275 kb on - strand, within pabA at 414.312 kb on + strand at 414.345 kb on + strand at 414.350 kb on + strand at 414.373 kb on + strand at 414.425 kb on - strand, within DVU0365 at 414.430 kb on - strand, within DVU0365 at 414.430 kb on - strand, within DVU0365 at 414.438 kb on - strand, within DVU0365 at 414.438 kb on - strand, within DVU0365 at 414.440 kb on - strand, within DVU0365 at 414.440 kb on - strand, within DVU0365 at 414.440 kb on - strand, within DVU0365 at 414.501 kb on + strand, within DVU0365 at 414.509 kb on - strand, within DVU0365 at 414.509 kb on - strand, within DVU0365 at 414.602 kb on - strand, within DVU0365 at 414.627 kb on + strand, within DVU0365 at 414.634 kb on + strand, within DVU0365 at 414.708 kb on + strand, within DVU0365 at 414.713 kb on + strand, within DVU0365 at 414.750 kb on - strand, within DVU0365 at 414.838 kb on + strand, within DVU0365 at 414.887 kb on - strand, within DVU0365 at 415.004 kb on - strand, within DVU0365 at 415.018 kb on - strand at 415.075 kb on + strand at 415.097 kb on + strand at 415.100 kb on - strand at 415.102 kb on + strand at 415.105 kb on - strand at 415.125 kb on + strand at 415.335 kb on + strand, within DVU0366 at 415.335 kb on + strand, within DVU0366 at 415.343 kb on - strand, within DVU0366 at 415.395 kb on - strand, within DVU0366 at 415.395 kb on - strand, within DVU0366 at 415.400 kb on + strand, within DVU0366 at 415.408 kb on - strand, within DVU0366 at 415.433 kb on - strand, within DVU0366 at 415.440 kb on + strand, within DVU0366 at 415.448 kb on - strand, within DVU0366 at 415.466 kb on + strand, within DVU0366 at 415.513 kb on + strand, within DVU0366 at 415.526 kb on + strand, within DVU0366 at 415.537 kb on + strand, within DVU0366 at 415.590 kb on + strand, within DVU0366 at 415.663 kb on + strand, within DVU0366 at 415.676 kb on - strand, within DVU0366 at 415.742 kb on - strand, within DVU0366 at 415.785 kb on - strand, within DVU0366 at 415.814 kb on + strand, within DVU0366 at 415.846 kb on - strand at 415.880 kb on + strand at 415.937 kb on - strand at 416.058 kb on + strand at 416.081 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Tungstate 2mM remove 413,430 - -0.8 413,523 - -0.7 413,531 - +1.8 413,549 - +1.1 413,570 + -0.9 413,577 + +0.3 413,578 - -1.9 413,578 - +1.1 413,587 - -1.1 413,641 + +0.9 413,680 + -2.1 413,709 - -2.5 413,719 - -0.7 413,755 + -1.3 413,796 - -1.0 413,811 - +0.1 413,858 - pabA DVU0364 0.14 +0.4 413,935 + pabA DVU0364 0.28 +1.1 413,964 + pabA DVU0364 0.33 -1.5 413,977 - pabA DVU0364 0.35 +2.3 413,990 - pabA DVU0364 0.38 +2.3 414,007 - pabA DVU0364 0.41 -1.7 414,012 + pabA DVU0364 0.42 +0.1 414,018 + pabA DVU0364 0.43 +1.8 414,020 - pabA DVU0364 0.43 -2.4 414,103 + pabA DVU0364 0.58 -1.6 414,149 - pabA DVU0364 0.66 -2.5 414,186 - pabA DVU0364 0.73 -1.7 414,224 + pabA DVU0364 0.80 -1.5 414,275 - pabA DVU0364 0.89 -1.7 414,312 + +0.5 414,345 + -2.0 414,350 + -1.2 414,373 + -0.4 414,425 - DVU0365 0.12 +0.1 414,430 - DVU0365 0.13 -1.4 414,430 - DVU0365 0.13 +1.6 414,438 - DVU0365 0.14 -0.1 414,438 - DVU0365 0.14 -0.7 414,440 - DVU0365 0.14 -1.9 414,440 - DVU0365 0.14 -0.1 414,440 - DVU0365 0.14 -0.8 414,501 + DVU0365 0.22 +1.1 414,509 - DVU0365 0.24 -1.5 414,509 - DVU0365 0.24 +1.6 414,602 - DVU0365 0.36 -2.1 414,627 + DVU0365 0.39 -1.1 414,634 + DVU0365 0.40 -0.3 414,708 + DVU0365 0.50 +1.3 414,713 + DVU0365 0.51 -0.1 414,750 - DVU0365 0.55 -0.5 414,838 + DVU0365 0.67 -1.1 414,887 - DVU0365 0.74 +0.4 415,004 - DVU0365 0.89 -1.2 415,018 - -0.9 415,075 + -1.7 415,097 + -3.3 415,100 - -1.3 415,102 + -2.0 415,105 - -0.7 415,125 + -2.1 415,335 + DVU0366 0.30 +0.2 415,335 + DVU0366 0.30 -1.5 415,343 - DVU0366 0.31 -1.9 415,395 - DVU0366 0.37 -0.3 415,395 - DVU0366 0.37 -0.9 415,400 + DVU0366 0.38 +0.3 415,408 - DVU0366 0.39 +1.8 415,433 - DVU0366 0.42 -1.0 415,440 + DVU0366 0.43 +0.3 415,448 - DVU0366 0.44 -1.3 415,466 + DVU0366 0.46 -0.0 415,513 + DVU0366 0.51 +1.3 415,526 + DVU0366 0.53 -1.9 415,537 + DVU0366 0.54 -0.0 415,590 + DVU0366 0.60 -0.4 415,663 + DVU0366 0.69 +0.8 415,676 - DVU0366 0.70 -0.8 415,742 - DVU0366 0.78 -2.0 415,785 - DVU0366 0.83 -0.1 415,814 + DVU0366 0.87 -1.3 415,846 - -1.9 415,880 + -2.0 415,937 - -2.3 416,058 + +0.3 416,081 - +1.1
Or see this region's nucleotide sequence