Experiment: Pyruvate-Sulfite (60-20mM) with Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2646 and DVU2647 are separated by 49 nucleotides DVU2647 and DVU2648 are separated by 69 nucleotides DVU2648 and DVU2649 overlap by 4 nucleotides DVU2649 and DVU2650 are separated by 544 nucleotides
DVU2646: DVU2646 - 1-aminocyclopropane-1-carboxylate deaminase (TIGR), at 2,763,062 to 2,764,060
DVU2646
DVU2647: DVU2647 - endoribonuclease, L-PSP family (TIGR), at 2,764,110 to 2,764,499
DVU2647
DVU2648: DVU2648 - hypothetical protein (TIGR), at 2,764,569 to 2,764,895
DVU2648
DVU2649: DVU2649 - hypothetical protein (TIGR), at 2,764,892 to 2,765,152
DVU2649
DVU2650: DVU2650 - hypothetical protein (TIGR), at 2,765,697 to 2,766,302
DVU2650
Position (kb)
2764
2765 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2763.749 kb on + strand, within DVU2646 at 2763.771 kb on - strand, within DVU2646 at 2763.806 kb on + strand, within DVU2646 at 2763.825 kb on + strand, within DVU2646 at 2763.833 kb on - strand, within DVU2646 at 2763.896 kb on - strand, within DVU2646 at 2763.940 kb on + strand, within DVU2646 at 2764.083 kb on + strand at 2764.096 kb on + strand at 2764.104 kb on - strand at 2764.115 kb on - strand at 2764.115 kb on - strand at 2764.158 kb on + strand, within DVU2647 at 2764.166 kb on - strand, within DVU2647 at 2764.166 kb on - strand, within DVU2647 at 2764.204 kb on + strand, within DVU2647 at 2764.209 kb on + strand, within DVU2647 at 2764.212 kb on - strand, within DVU2647 at 2764.234 kb on + strand, within DVU2647 at 2764.287 kb on - strand, within DVU2647 at 2764.326 kb on + strand, within DVU2647 at 2764.357 kb on - strand, within DVU2647 at 2764.495 kb on + strand at 2764.661 kb on - strand, within DVU2648 at 2764.684 kb on - strand, within DVU2648 at 2764.742 kb on - strand, within DVU2648 at 2764.767 kb on - strand, within DVU2648 at 2764.848 kb on + strand, within DVU2648 at 2764.856 kb on - strand, within DVU2648 at 2764.875 kb on - strand at 2764.899 kb on - strand at 2764.922 kb on - strand, within DVU2649 at 2764.944 kb on - strand, within DVU2649 at 2764.944 kb on - strand, within DVU2649 at 2764.955 kb on + strand, within DVU2649 at 2765.045 kb on + strand, within DVU2649 at 2765.053 kb on - strand, within DVU2649 at 2765.350 kb on + strand at 2765.360 kb on + strand at 2765.390 kb on - strand at 2765.524 kb on + strand at 2765.532 kb on - strand at 2765.582 kb on - strand at 2765.654 kb on - strand at 2765.654 kb on - strand at 2765.771 kb on + strand, within DVU2650
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Tungstate 2mM remove 2,763,749 + DVU2646 0.69 +0.8 2,763,771 - DVU2646 0.71 +0.2 2,763,806 + DVU2646 0.74 +1.4 2,763,825 + DVU2646 0.76 -0.6 2,763,833 - DVU2646 0.77 +0.6 2,763,896 - DVU2646 0.83 -2.0 2,763,940 + DVU2646 0.88 +0.6 2,764,083 + +0.5 2,764,096 + +1.5 2,764,104 - +0.2 2,764,115 - -1.3 2,764,115 - +0.8 2,764,158 + DVU2647 0.12 +1.3 2,764,166 - DVU2647 0.14 -0.8 2,764,166 - DVU2647 0.14 +0.4 2,764,204 + DVU2647 0.24 -1.1 2,764,209 + DVU2647 0.25 -1.2 2,764,212 - DVU2647 0.26 +3.2 2,764,234 + DVU2647 0.32 -1.1 2,764,287 - DVU2647 0.45 -1.5 2,764,326 + DVU2647 0.55 -0.1 2,764,357 - DVU2647 0.63 +2.8 2,764,495 + -0.5 2,764,661 - DVU2648 0.28 -0.7 2,764,684 - DVU2648 0.35 +0.1 2,764,742 - DVU2648 0.53 -1.3 2,764,767 - DVU2648 0.61 -2.8 2,764,848 + DVU2648 0.85 -1.4 2,764,856 - DVU2648 0.88 +0.7 2,764,875 - +1.2 2,764,899 - +0.2 2,764,922 - DVU2649 0.11 -0.8 2,764,944 - DVU2649 0.20 -1.6 2,764,944 - DVU2649 0.20 +1.2 2,764,955 + DVU2649 0.24 -1.6 2,765,045 + DVU2649 0.59 -1.5 2,765,053 - DVU2649 0.62 +3.8 2,765,350 + +2.2 2,765,360 + +2.0 2,765,390 - -0.6 2,765,524 + -1.2 2,765,532 - -1.2 2,765,582 - -1.9 2,765,654 - +0.0 2,765,654 - +1.8 2,765,771 + DVU2650 0.12 +1.1
Or see this region's nucleotide sequence