Experiment: MoYLS4 media with N2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1758 and DvMF_1759 are separated by 216 nucleotides DvMF_1759 and DvMF_1760 are separated by 129 nucleotides
DvMF_1758: DvMF_1758 - UvrD/REP helicase (RefSeq), at 2,146,637 to 2,150,371
_1758
DvMF_1759: DvMF_1759 - hypothetical protein (RefSeq), at 2,150,588 to 2,151,784
_1759
DvMF_1760: DvMF_1760 - hypothetical protein (RefSeq), at 2,151,914 to 2,155,576
_1760
Position (kb)
2150
2151
2152 Strain fitness (log2 ratio)
-1
0
1 at 2149.606 kb on - strand, within DvMF_1758 at 2149.614 kb on - strand, within DvMF_1758 at 2149.860 kb on + strand, within DvMF_1758 at 2149.860 kb on + strand, within DvMF_1758 at 2150.090 kb on + strand at 2150.301 kb on + strand at 2150.363 kb on - strand at 2150.442 kb on + strand at 2150.477 kb on - strand at 2150.735 kb on + strand, within DvMF_1759 at 2150.735 kb on - strand, within DvMF_1759 at 2150.921 kb on + strand, within DvMF_1759 at 2150.955 kb on + strand, within DvMF_1759 at 2151.034 kb on + strand, within DvMF_1759 at 2151.338 kb on - strand, within DvMF_1759 at 2151.340 kb on + strand, within DvMF_1759 at 2151.340 kb on + strand, within DvMF_1759 at 2151.340 kb on + strand, within DvMF_1759 at 2151.404 kb on - strand, within DvMF_1759 at 2151.429 kb on + strand, within DvMF_1759 at 2151.569 kb on + strand, within DvMF_1759 at 2151.764 kb on + strand at 2151.884 kb on + strand at 2151.892 kb on - strand at 2151.951 kb on + strand at 2151.951 kb on + strand at 2151.959 kb on - strand at 2151.995 kb on - strand at 2151.995 kb on - strand at 2152.202 kb on + strand at 2152.290 kb on + strand, within DvMF_1760 at 2152.385 kb on - strand, within DvMF_1760 at 2152.397 kb on + strand, within DvMF_1760 at 2152.408 kb on + strand, within DvMF_1760 at 2152.426 kb on - strand, within DvMF_1760
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media with N2 remove 2,149,606 - DvMF_1758 0.79 -0.4 2,149,614 - DvMF_1758 0.80 -0.5 2,149,860 + DvMF_1758 0.86 -0.0 2,149,860 + DvMF_1758 0.86 -0.7 2,150,090 + -0.5 2,150,301 + -0.1 2,150,363 - -0.5 2,150,442 + -0.8 2,150,477 - -0.3 2,150,735 + DvMF_1759 0.12 -0.3 2,150,735 - DvMF_1759 0.12 -0.6 2,150,921 + DvMF_1759 0.28 -1.0 2,150,955 + DvMF_1759 0.31 -0.8 2,151,034 + DvMF_1759 0.37 -0.4 2,151,338 - DvMF_1759 0.63 -1.3 2,151,340 + DvMF_1759 0.63 -0.6 2,151,340 + DvMF_1759 0.63 -0.6 2,151,340 + DvMF_1759 0.63 -1.3 2,151,404 - DvMF_1759 0.68 -0.3 2,151,429 + DvMF_1759 0.70 -0.5 2,151,569 + DvMF_1759 0.82 -0.3 2,151,764 + -0.5 2,151,884 + -0.6 2,151,892 - -0.2 2,151,951 + -0.1 2,151,951 + -0.6 2,151,959 - -0.9 2,151,995 - -0.6 2,151,995 - -0.5 2,152,202 + -1.1 2,152,290 + DvMF_1760 0.10 -0.6 2,152,385 - DvMF_1760 0.13 -0.6 2,152,397 + DvMF_1760 0.13 -0.5 2,152,408 + DvMF_1760 0.13 -0.4 2,152,426 - DvMF_1760 0.14 +0.2
Or see this region's nucleotide sequence