Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_006190

Experiment: R2A with N-decanoyl-DL-Homoserine lactone 10 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with N-decanoyl-DL-Homoserine lactone 10 uM
2,550,642	+		ABIE53_006189	0.51	+1.9
2,550,642	+		ABIE53_006189	0.51	-0.9
2,550,942	+		ABIE53_006189	0.71	+0.2
2,550,942	+		ABIE53_006189	0.71	-1.1
2,550,942	+		ABIE53_006189	0.71	-1.4
2,550,942	+		ABIE53_006189	0.71	-1.4
2,550,942	+		ABIE53_006189	0.71	-0.8
2,550,942	+		ABIE53_006189	0.71	-0.4
2,550,942	+		ABIE53_006189	0.71	+0.2
2,550,942	+		ABIE53_006189	0.71	+1.3
2,550,942	+		ABIE53_006189	0.71	+0.9
2,550,942	+		ABIE53_006189	0.71	+0.9
2,550,942	+		ABIE53_006189	0.71	-0.5
2,550,942	+		ABIE53_006189	0.71	-0.5
2,550,942	+		ABIE53_006189	0.71	+1.7
2,550,942	+		ABIE53_006189	0.71	+1.5
2,550,943	-		ABIE53_006189	0.72	-0.2
2,550,943	-		ABIE53_006189	0.72	+0.5
2,550,943	-		ABIE53_006189	0.72	-1.4
2,550,943	-		ABIE53_006189	0.72	+2.2
2,550,943	-		ABIE53_006189	0.72	-0.1
2,550,943	-		ABIE53_006189	0.72	-1.9
2,550,943	-		ABIE53_006189	0.72	-0.6
2,550,943	-		ABIE53_006189	0.72	+1.6
2,550,943	-		ABIE53_006189	0.72	+0.4
2,550,944	-		ABIE53_006189	0.72	-0.6
2,551,092	-		ABIE53_006189	0.81	-2.4
2,551,123	-		ABIE53_006189	0.84	+0.9
2,551,140	+		ABIE53_006189	0.85	+0.2
2,551,140	+		ABIE53_006189	0.85	+0.1
2,551,140	+		ABIE53_006189	0.85	+0.9
2,551,140	+		ABIE53_006189	0.85	-0.7
2,551,140	+		ABIE53_006189	0.85	-0.1
2,551,141	-		ABIE53_006189	0.85	+3.5
2,551,142	+		ABIE53_006189	0.85	+0.9
2,551,142	+		ABIE53_006189	0.85	+0.4
2,551,142	+		ABIE53_006189	0.85	-0.1
2,551,142	+		ABIE53_006189	0.85	+0.9
2,551,142	+		ABIE53_006189	0.85	+0.2
2,551,142	+		ABIE53_006189	0.85	-1.9
2,551,142	+		ABIE53_006189	0.85	-1.3
2,551,142	+		ABIE53_006189	0.85	+0.4
2,551,142	+		ABIE53_006189	0.85	+0.9
2,551,142	+		ABIE53_006189	0.85	-0.6
2,551,142	+		ABIE53_006189	0.85	-1.1
2,551,143	-		ABIE53_006189	0.85	+0.2
2,551,143	-		ABIE53_006189	0.85	+1.7
2,551,143	-		ABIE53_006189	0.85	+1.9
2,551,143	-		ABIE53_006189	0.85	-2.1
2,551,143	-		ABIE53_006189	0.85	-0.5
2,551,143	-		ABIE53_006189	0.85	-0.1
2,551,143	-		ABIE53_006189	0.85	-0.6
2,551,143	-		ABIE53_006189	0.85	-2.5
2,551,143	-		ABIE53_006189	0.85	-0.1
2,551,167	+		ABIE53_006189	0.86	+0.4
2,551,167	+		ABIE53_006189	0.86	+0.3
2,551,167	+		ABIE53_006189	0.86	-0.5
2,551,167	+		ABIE53_006189	0.86	-0.6
2,551,168	-		ABIE53_006189	0.87	+0.9
2,551,168	-		ABIE53_006189	0.87	+1.9
2,551,168	-		ABIE53_006189	0.87	-0.3
2,551,168	-		ABIE53_006189	0.87	-0.4
2,551,176	+		ABIE53_006189	0.87	+0.6
2,551,176	+		ABIE53_006189	0.87	+0.9
2,551,176	+		ABIE53_006189	0.87	-1.3
2,551,176	+		ABIE53_006189	0.87	-0.6
2,551,177	-		ABIE53_006189	0.87	+0.4
2,551,177	-		ABIE53_006189	0.87	+1.9
2,551,177	-		ABIE53_006189	0.87	+1.9
2,551,177	-		ABIE53_006189	0.87	-0.1
2,551,177	-		ABIE53_006189	0.87	-0.5
2,551,446	-		ABIE53_006190	0.11	-1.1
2,551,451	+		ABIE53_006190	0.12	+0.5
2,551,451	+		ABIE53_006190	0.12	+1.9
2,551,452	-		ABIE53_006190	0.12	+0.9
2,551,452	-		ABIE53_006190	0.12	-0.1
2,551,452	-		ABIE53_006190	0.12	+0.9
2,551,452	-		ABIE53_006190	0.12	-2.1
2,551,452	-		ABIE53_006190	0.12	-2.1
2,551,575	+		ABIE53_006190	0.28	+0.9
2,551,575	+		ABIE53_006190	0.28	-2.2
2,551,575	+		ABIE53_006190	0.28	+0.9
2,551,576	-		ABIE53_006190	0.28	+0.9
2,551,576	-		ABIE53_006190	0.28	+3.3
2,551,742	+		ABIE53_006190	0.51	-1.9
2,551,742	+		ABIE53_006190	0.51	-0.8
2,551,742	+		ABIE53_006190	0.51	+1.4
2,551,743	-		ABIE53_006190	0.51	+0.1
2,551,808	+		ABIE53_006190	0.60	-0.4
2,551,808	+		ABIE53_006190	0.60	+2.3
2,551,808	+		ABIE53_006190	0.60	+0.9
2,551,808	+		ABIE53_006190	0.60	-0.7
2,551,809	-		ABIE53_006190	0.60	+1.7
2,551,809	-		ABIE53_006190	0.60	-0.6
2,551,809	-		ABIE53_006190	0.60	-0.1
2,552,015	+		ABIE53_006190	0.88	-1.2
2,552,016	-		ABIE53_006190	0.88	-1.8
2,552,059	+				+1.9
2,552,059	+				+0.5
2,552,059	+				-0.2
2,552,059	+				-1.4
2,552,059	+				-2.6
2,552,059	+				+1.3
2,552,060	-				-1.2
2,552,060	-				+0.9
2,552,060	-				+1.1
2,552,103	+				+0.2
2,552,103	+				-0.7
2,552,103	+				-1.4
2,552,104	-				-0.5
2,552,104	-				-1.5
2,552,123	+				-2.6
2,552,123	+				+3.8
2,552,123	+				-0.1
2,552,123	+				-1.1
2,552,123	+				+0.2
2,552,123	+				+0.9
2,552,123	+				-0.1
2,552,123	+				+1.5
2,552,124	-				-0.4
2,552,124	-				+0.5
2,552,124	-				-1.6
2,552,124	-				-0.3
2,552,124	-				-0.1
2,552,124	-				-0.4
2,552,124	-				-0.4
2,552,140	+				-0.4
2,552,140	+				-0.2
2,552,140	+				+1.9
2,552,140	+				-0.6
2,552,140	+				-1.7
2,552,140	+				+0.2
2,552,140	+				+1.8
2,552,140	+				+0.8
2,552,140	+				-0.6
2,552,140	+				+0.9
2,552,140	+				-0.6
2,552,141	-				-1.6
2,552,141	-				+0.5
2,552,141	-				-0.4
2,552,141	-				-1.1
2,552,141	-				+0.9
2,552,141	-				+1.8
2,552,141	-				+0.3
2,552,141	-				-0.4
2,552,141	-				-0.1
2,552,141	-				-1.6
2,552,141	-				+0.5
2,552,142	+				-0.1
2,552,142	+				-0.6
2,552,143	-				+0.2
2,552,143	-				-0.6
2,552,143	-				+0.3
2,552,143	-				-1.4
2,552,273	+				-2.0
2,552,273	+				+0.7
2,552,273	+				-0.6
2,552,273	+				+0.4
2,552,273	+				-1.6
2,552,274	-				+0.9
2,552,274	-				+0.5
2,552,274	-				-0.2
2,552,274	-				+0.9
2,552,348	-				-0.9
2,552,381	+				-1.1
2,552,401	+				+0.7
2,552,402	-				-0.1
2,552,416	-				-1.4
2,552,416	-				-1.1
2,552,416	-				-0.2
2,552,625	+				+0.0
2,552,625	+				-1.3
2,552,625	+				+0.4
2,552,625	+				+1.5
2,552,626	-				-0.8
2,552,626	-				+1.6
2,552,626	-				-2.1
2,552,731	-				+0.9
2,552,732	+				+0.7
2,552,732	+				+1.7
2,552,733	-				-0.6
2,552,758	+				-0.2
2,552,759	-				-1.1
2,552,801	-				-0.4
2,552,822	+				+0.6
2,552,823	-				+0.4
2,552,934	+		ABIE53_006191	0.12	+0.4