Experiment: MoYLS4 media with NH4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0570 and DvMF_0571 are separated by 451 nucleotides DvMF_0571 and DvMF_0572 are separated by 227 nucleotides
DvMF_0570: DvMF_0570 - polysaccharide deacetylase (RefSeq), at 673,401 to 674,552
_0570
DvMF_0571: DvMF_0571 - outer membrane autotransporter barrel domain protein (RefSeq), at 675,004 to 676,917
_0571
DvMF_0572: DvMF_0572 - Threonine aldolase (RefSeq), at 677,145 to 678,170
_0572
Position (kb) 675
676
677 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 674.942 kb on + strand at 675.046 kb on - strand at 675.124 kb on + strand at 675.148 kb on - strand at 675.349 kb on + strand, within DvMF_0571 at 675.418 kb on + strand, within DvMF_0571 at 675.441 kb on - strand, within DvMF_0571 at 675.451 kb on - strand, within DvMF_0571 at 675.494 kb on + strand, within DvMF_0571 at 675.502 kb on - strand, within DvMF_0571 at 675.690 kb on + strand, within DvMF_0571 at 675.770 kb on + strand, within DvMF_0571 at 675.805 kb on - strand, within DvMF_0571 at 676.024 kb on - strand, within DvMF_0571 at 676.039 kb on + strand, within DvMF_0571 at 676.191 kb on + strand, within DvMF_0571 at 676.420 kb on + strand, within DvMF_0571 at 676.538 kb on + strand, within DvMF_0571 at 676.546 kb on - strand, within DvMF_0571 at 676.737 kb on - strand at 676.781 kb on + strand at 676.781 kb on + strand at 676.979 kb on - strand at 677.117 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media with NH4 remove 674,942 + +0.0 675,046 - -1.0 675,124 + -0.6 675,148 - -0.7 675,349 + DvMF_0571 0.18 -1.0 675,418 + DvMF_0571 0.22 -0.6 675,441 - DvMF_0571 0.23 -0.2 675,451 - DvMF_0571 0.23 -1.2 675,494 + DvMF_0571 0.26 +0.0 675,502 - DvMF_0571 0.26 +0.1 675,690 + DvMF_0571 0.36 -0.4 675,770 + DvMF_0571 0.40 -0.6 675,805 - DvMF_0571 0.42 -0.5 676,024 - DvMF_0571 0.53 -0.9 676,039 + DvMF_0571 0.54 -0.4 676,191 + DvMF_0571 0.62 -0.5 676,420 + DvMF_0571 0.74 -3.1 676,538 + DvMF_0571 0.80 -0.8 676,546 - DvMF_0571 0.81 -1.1 676,737 - -0.5 676,781 + -0.4 676,781 + -0.4 676,979 - -0.4 677,117 + -0.4
Or see this region's nucleotide sequence