Experiment: Pyruvate-Sulfite (60-20mM) with Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0223 and DVU0224 are separated by 43 nucleotides DVU0224 and DVU0226 are separated by 386 nucleotides DVU0226 and DVU0227 are separated by 2 nucleotides DVU0227 and DORF3938 are separated by 84 nucleotides
DVU0223: DVU0223 - conserved hypothetical protein (TIGR), at 261,649 to 261,831
DVU0223
DVU0224: DVU0224 - conserved hypothetical protein (TIGR), at 261,875 to 262,270
DVU0224
DVU0226: DVU0226 - hypothetical protein (TIGR), at 262,657 to 263,796
DVU0226
DVU0227: DVU0227 - conserved hypothetical protein (TIGR), at 263,799 to 264,329
DVU0227
DORF3938: DORF3938 - no description, at 264,414 to 264,713
DORF3938
Position (kb) 262
263
264 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6
7 at 261.683 kb on + strand, within DVU0223 at 261.787 kb on + strand, within DVU0223 at 262.305 kb on - strand at 262.317 kb on + strand at 262.335 kb on - strand at 262.392 kb on - strand at 262.493 kb on - strand at 262.550 kb on + strand at 262.567 kb on + strand at 262.567 kb on + strand at 262.568 kb on - strand at 262.590 kb on - strand at 262.617 kb on + strand at 262.695 kb on - strand at 262.719 kb on - strand at 262.754 kb on + strand at 262.788 kb on - strand, within DVU0226 at 262.803 kb on + strand, within DVU0226 at 262.810 kb on - strand, within DVU0226 at 262.816 kb on - strand, within DVU0226 at 262.875 kb on + strand, within DVU0226 at 262.921 kb on + strand, within DVU0226 at 262.924 kb on - strand, within DVU0226 at 262.934 kb on + strand, within DVU0226 at 263.204 kb on + strand, within DVU0226 at 263.223 kb on + strand, within DVU0226 at 263.231 kb on - strand, within DVU0226 at 263.269 kb on + strand, within DVU0226 at 263.289 kb on - strand, within DVU0226 at 263.294 kb on + strand, within DVU0226 at 263.337 kb on + strand, within DVU0226 at 263.339 kb on + strand, within DVU0226 at 263.339 kb on + strand, within DVU0226 at 263.345 kb on - strand, within DVU0226 at 263.393 kb on - strand, within DVU0226 at 263.400 kb on - strand, within DVU0226 at 263.436 kb on + strand, within DVU0226 at 263.488 kb on - strand, within DVU0226 at 263.541 kb on - strand, within DVU0226 at 263.577 kb on - strand, within DVU0226 at 263.577 kb on - strand, within DVU0226 at 263.577 kb on - strand, within DVU0226 at 263.577 kb on - strand, within DVU0226 at 263.577 kb on - strand, within DVU0226 at 263.632 kb on - strand, within DVU0226 at 263.650 kb on + strand, within DVU0226 at 263.879 kb on + strand, within DVU0227 at 263.989 kb on - strand, within DVU0227 at 264.128 kb on - strand, within DVU0227 at 264.227 kb on - strand, within DVU0227 at 264.247 kb on - strand, within DVU0227 at 264.372 kb on - strand at 264.401 kb on + strand at 264.401 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Tungstate 2mM remove 261,683 + DVU0223 0.19 -0.1 261,787 + DVU0223 0.75 +0.3 262,305 - -0.1 262,317 + -0.3 262,335 - -1.2 262,392 - +0.2 262,493 - +3.8 262,550 + +0.2 262,567 + -0.0 262,567 + +0.8 262,568 - -0.1 262,590 - +1.2 262,617 + -0.6 262,695 - -1.6 262,719 - +1.7 262,754 + -0.9 262,788 - DVU0226 0.11 +1.0 262,803 + DVU0226 0.13 +7.6 262,810 - DVU0226 0.13 -0.7 262,816 - DVU0226 0.14 +1.3 262,875 + DVU0226 0.19 +0.2 262,921 + DVU0226 0.23 -0.1 262,924 - DVU0226 0.23 +0.3 262,934 + DVU0226 0.24 -2.0 263,204 + DVU0226 0.48 -0.8 263,223 + DVU0226 0.50 +0.1 263,231 - DVU0226 0.50 -0.4 263,269 + DVU0226 0.54 +3.6 263,289 - DVU0226 0.55 -1.2 263,294 + DVU0226 0.56 -0.0 263,337 + DVU0226 0.60 +1.0 263,339 + DVU0226 0.60 -1.6 263,339 + DVU0226 0.60 -0.7 263,345 - DVU0226 0.60 -0.3 263,393 - DVU0226 0.65 -1.7 263,400 - DVU0226 0.65 -1.1 263,436 + DVU0226 0.68 -1.4 263,488 - DVU0226 0.73 +1.5 263,541 - DVU0226 0.78 +2.2 263,577 - DVU0226 0.81 +0.0 263,577 - DVU0226 0.81 +0.3 263,577 - DVU0226 0.81 -0.4 263,577 - DVU0226 0.81 +0.2 263,577 - DVU0226 0.81 -1.0 263,632 - DVU0226 0.86 +0.8 263,650 + DVU0226 0.87 +0.1 263,879 + DVU0227 0.15 +0.8 263,989 - DVU0227 0.36 -1.6 264,128 - DVU0227 0.62 -0.8 264,227 - DVU0227 0.81 -1.5 264,247 - DVU0227 0.84 +1.1 264,372 - -0.5 264,401 + +0.7 264,401 + -0.3
Or see this region's nucleotide sequence