Experiment: Pyruvate-Sulfite (60-20mM) with Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2775 and dsrC are separated by 354 nucleotides dsrC and DVU2777 are separated by 196 nucleotides DVU2777 and DVU2778 are separated by 65 nucleotides DVU2778 and DVU2779 are separated by 382 nucleotides
DVU2775: DVU2775 - hypothetical protein (TIGR), at 2,882,832 to 2,883,107
DVU2775
DVU2776: dsrC - dissimilatory sulfite reductase, gamma subunit (TIGR), at 2,883,462 to 2,883,779
dsrC
DVU2777: DVU2777 - hypothetical protein (TIGR), at 2,883,976 to 2,884,242
DVU2777
DVU2778: DVU2778 - hypothetical protein (TIGR), at 2,884,308 to 2,884,580
DVU2778
DVU2779: DVU2779 - extracellular solute-binding protein, putative (TIGR), at 2,884,963 to 2,886,348
DVU2779
Position (kb)
2883
2884
2885 Strain fitness (log2 ratio)
-1
0
1
2 at 2883.132 kb on - strand at 2883.156 kb on - strand at 2883.169 kb on - strand at 2883.256 kb on - strand at 2883.354 kb on - strand at 2883.354 kb on - strand at 2883.906 kb on - strand at 2884.054 kb on + strand, within DVU2777 at 2884.064 kb on + strand, within DVU2777 at 2884.064 kb on + strand, within DVU2777 at 2884.064 kb on + strand, within DVU2777 at 2884.064 kb on + strand, within DVU2777 at 2884.069 kb on + strand, within DVU2777 at 2884.072 kb on - strand, within DVU2777 at 2884.072 kb on - strand, within DVU2777 at 2884.072 kb on - strand, within DVU2777 at 2884.094 kb on + strand, within DVU2777 at 2884.101 kb on + strand, within DVU2777 at 2884.220 kb on - strand at 2884.259 kb on - strand at 2884.306 kb on + strand at 2884.306 kb on + strand at 2884.326 kb on - strand at 2885.011 kb on - strand at 2885.159 kb on - strand, within DVU2779 at 2885.183 kb on + strand, within DVU2779 at 2885.227 kb on + strand, within DVU2779
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Tungstate 2mM remove 2,883,132 - -1.0 2,883,156 - -1.5 2,883,169 - +1.5 2,883,256 - +2.5 2,883,354 - +1.7 2,883,354 - +0.7 2,883,906 - -0.3 2,884,054 + DVU2777 0.29 +0.1 2,884,064 + DVU2777 0.33 -1.0 2,884,064 + DVU2777 0.33 +0.7 2,884,064 + DVU2777 0.33 -0.9 2,884,064 + DVU2777 0.33 -0.8 2,884,069 + DVU2777 0.35 -0.5 2,884,072 - DVU2777 0.36 +0.0 2,884,072 - DVU2777 0.36 +0.8 2,884,072 - DVU2777 0.36 +1.5 2,884,094 + DVU2777 0.44 -1.0 2,884,101 + DVU2777 0.47 +1.9 2,884,220 - +0.5 2,884,259 - -1.5 2,884,306 + -0.7 2,884,306 + +0.8 2,884,326 - -0.4 2,885,011 - +0.8 2,885,159 - DVU2779 0.14 +1.0 2,885,183 + DVU2779 0.16 +1.4 2,885,227 + DVU2779 0.19 +2.0
Or see this region's nucleotide sequence