Experiment: Pyruvate-Sulfite (60-20mM) with Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2684 and DVU2686 are separated by 567 nucleotides DVU2686 and DVU2687 are separated by 336 nucleotides
DVU2684: DVU2684 - hypothetical protein (TIGR), at 2,798,343 to 2,799,023
DVU2684
DVU2686: DVU2686 - peptidase, S24 family (TIGR), at 2,799,591 to 2,800,373
DVU2686
DVU2687: DVU2687 - hypothetical protein (TIGR), at 2,800,710 to 2,801,090
DVU2687
Position (kb)
2799
2800
2801 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2798.677 kb on + strand, within DVU2684 at 2798.688 kb on - strand, within DVU2684 at 2798.820 kb on + strand, within DVU2684 at 2798.850 kb on - strand, within DVU2684 at 2798.868 kb on + strand, within DVU2684 at 2798.868 kb on + strand, within DVU2684 at 2798.944 kb on + strand, within DVU2684 at 2799.015 kb on - strand at 2799.020 kb on - strand at 2799.031 kb on + strand at 2799.039 kb on - strand at 2799.057 kb on - strand at 2799.129 kb on - strand at 2799.155 kb on + strand at 2799.174 kb on + strand at 2799.177 kb on - strand at 2799.182 kb on - strand at 2799.182 kb on - strand at 2799.205 kb on - strand at 2799.453 kb on + strand at 2799.456 kb on - strand at 2799.461 kb on - strand at 2800.380 kb on - strand at 2800.584 kb on + strand at 2800.586 kb on + strand at 2800.592 kb on - strand at 2800.615 kb on - strand at 2800.645 kb on + strand at 2800.911 kb on - strand, within DVU2687 at 2800.971 kb on + strand, within DVU2687 at 2800.978 kb on + strand, within DVU2687 at 2800.998 kb on + strand, within DVU2687 at 2801.001 kb on - strand, within DVU2687 at 2801.040 kb on - strand, within DVU2687 at 2801.135 kb on - strand at 2801.169 kb on - strand at 2801.342 kb on + strand at 2801.342 kb on + strand at 2801.350 kb on - strand at 2801.350 kb on - strand at 2801.352 kb on + strand at 2801.359 kb on + strand at 2801.360 kb on - strand at 2801.367 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Tungstate 2mM remove 2,798,677 + DVU2684 0.49 -1.7 2,798,688 - DVU2684 0.51 +0.2 2,798,820 + DVU2684 0.70 -2.1 2,798,850 - DVU2684 0.74 -0.7 2,798,868 + DVU2684 0.77 +1.9 2,798,868 + DVU2684 0.77 -1.5 2,798,944 + DVU2684 0.88 -0.1 2,799,015 - -0.4 2,799,020 - -1.0 2,799,031 + +0.8 2,799,039 - +1.4 2,799,057 - -0.6 2,799,129 - +1.6 2,799,155 + +0.5 2,799,174 + +1.8 2,799,177 - -0.9 2,799,182 - -2.1 2,799,182 - -0.5 2,799,205 - +0.2 2,799,453 + -1.1 2,799,456 - +0.9 2,799,461 - +0.2 2,800,380 - -0.3 2,800,584 + -3.5 2,800,586 + -2.2 2,800,592 - -2.2 2,800,615 - +0.3 2,800,645 + -1.0 2,800,911 - DVU2687 0.53 -0.8 2,800,971 + DVU2687 0.69 -0.4 2,800,978 + DVU2687 0.70 -1.8 2,800,998 + DVU2687 0.76 -1.2 2,801,001 - DVU2687 0.76 +1.4 2,801,040 - DVU2687 0.87 -1.1 2,801,135 - -1.4 2,801,169 - -0.7 2,801,342 + +1.3 2,801,342 + -0.4 2,801,350 - -0.9 2,801,350 - -0.6 2,801,352 + +1.4 2,801,359 + -0.3 2,801,360 - -0.7 2,801,367 - -0.8
Or see this region's nucleotide sequence