Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2416

Experiment: No grazer plate rep 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	No grazer plate rep 2
2,488,394	+				-1.2
2,488,394	+				+1.2
2,488,438	+				+0.8
2,488,487	+				-1.1
2,488,490	-				-0.4
2,488,490	-				-0.3
2,488,490	-				-1.0
2,488,490	-				+1.4
2,488,491	-				+0.1
2,488,495	-				-0.8
2,488,495	-				-2.2
2,488,499	+				-1.6
2,488,500	-				+0.1
2,488,514	+				-1.6
2,488,514	+				-2.1
2,488,522	-	srrA	Synpcc7942_2416	0.11	+0.6
2,488,522	-	srrA	Synpcc7942_2416	0.11	-0.1
2,488,527	-	srrA	Synpcc7942_2416	0.11	+0.3
2,488,542	-	srrA	Synpcc7942_2416	0.13	-1.0
2,488,574	-	srrA	Synpcc7942_2416	0.17	-1.4
2,488,588	+	srrA	Synpcc7942_2416	0.19	-0.1
2,488,591	-	srrA	Synpcc7942_2416	0.20	-0.6
2,488,596	-	srrA	Synpcc7942_2416	0.20	-0.4
2,488,596	-	srrA	Synpcc7942_2416	0.20	+0.4
2,488,603	+	srrA	Synpcc7942_2416	0.21	+0.1
2,488,617	-	srrA	Synpcc7942_2416	0.23	-2.7
2,488,617	-	srrA	Synpcc7942_2416	0.23	-0.5
2,488,617	-	srrA	Synpcc7942_2416	0.23	+0.2
2,488,646	-	srrA	Synpcc7942_2416	0.27	-0.9
2,488,648	-	srrA	Synpcc7942_2416	0.27	-1.6
2,488,669	+	srrA	Synpcc7942_2416	0.30	-0.1
2,488,670	-	srrA	Synpcc7942_2416	0.30	+0.5
2,488,690	+	srrA	Synpcc7942_2416	0.33	-0.2
2,488,727	-	srrA	Synpcc7942_2416	0.37	-1.4
2,488,727	-	srrA	Synpcc7942_2416	0.37	-1.1
2,488,772	+	srrA	Synpcc7942_2416	0.43	-1.7
2,488,772	+	srrA	Synpcc7942_2416	0.43	-0.8
2,488,780	-	srrA	Synpcc7942_2416	0.44	+1.8
2,488,782	+	srrA	Synpcc7942_2416	0.45	-1.9
2,488,785	-	srrA	Synpcc7942_2416	0.45	+0.3
2,488,821	+	srrA	Synpcc7942_2416	0.50	+0.4
2,488,831	+	srrA	Synpcc7942_2416	0.51	-1.3
2,488,834	-	srrA	Synpcc7942_2416	0.51	-0.3
2,488,858	+	srrA	Synpcc7942_2416	0.54	+1.6
2,488,866	-	srrA	Synpcc7942_2416	0.55	+0.7
2,488,867	+	srrA	Synpcc7942_2416	0.56	-1.1
2,488,867	+	srrA	Synpcc7942_2416	0.56	-0.6
2,488,875	-	srrA	Synpcc7942_2416	0.57	-1.0
2,488,875	-	srrA	Synpcc7942_2416	0.57	-0.9
2,488,875	-	srrA	Synpcc7942_2416	0.57	-0.3
2,488,899	-	srrA	Synpcc7942_2416	0.60	+0.8
2,488,906	+	srrA	Synpcc7942_2416	0.61	-0.8
2,488,912	-	srrA	Synpcc7942_2416	0.61	+0.9
2,488,926	+	srrA	Synpcc7942_2416	0.63	-3.4
2,488,926	+	srrA	Synpcc7942_2416	0.63	-1.1
2,488,931	+	srrA	Synpcc7942_2416	0.64	-0.9
2,488,934	-	srrA	Synpcc7942_2416	0.64	-0.4
2,488,934	-	srrA	Synpcc7942_2416	0.64	-2.4
2,488,934	-	srrA	Synpcc7942_2416	0.64	-0.6
2,488,934	-	srrA	Synpcc7942_2416	0.64	-0.2
2,488,934	-	srrA	Synpcc7942_2416	0.64	+1.5
2,488,946	-	srrA	Synpcc7942_2416	0.66	+1.1
2,488,947	+	srrA	Synpcc7942_2416	0.66	-0.5
2,488,947	+	srrA	Synpcc7942_2416	0.66	-1.0
2,488,999	+	srrA	Synpcc7942_2416	0.73	+0.2
2,489,025	+	srrA	Synpcc7942_2416	0.76	-0.5
2,489,054	+	srrA	Synpcc7942_2416	0.80	-2.9
2,489,090	+	srrA	Synpcc7942_2416	0.85	+0.2
2,489,101	+	srrA	Synpcc7942_2416	0.86	-0.2
2,489,119	+	srrA	Synpcc7942_2416	0.88	-1.8
2,489,127	-	srrA	Synpcc7942_2416	0.89	-1.6
2,489,182	-				-0.1
2,489,191	+				-1.6
2,489,299	+				+0.6
2,489,354	+				+0.4
2,489,366	+				-1.4
2,489,374	-				+2.8
2,489,395	-				+0.2
2,489,452	-	srrA	Synpcc7942_2417	0.11	+0.7
2,489,493	+	srrA	Synpcc7942_2417	0.14	-1.6
2,489,496	-	srrA	Synpcc7942_2417	0.14	-1.6
2,489,514	-	srrA	Synpcc7942_2417	0.16	-1.6
2,489,537	-	srrA	Synpcc7942_2417	0.18	-1.4
2,489,537	-	srrA	Synpcc7942_2417	0.18	-1.8
2,489,545	-	srrA	Synpcc7942_2417	0.18	+0.6
2,489,561	+	srrA	Synpcc7942_2417	0.20	-2.2
2,489,613	+	srrA	Synpcc7942_2417	0.24	+0.1
2,489,623	-	srrA	Synpcc7942_2417	0.24	-2.6
2,489,678	-	srrA	Synpcc7942_2417	0.29	+0.4
2,489,716	+	srrA	Synpcc7942_2417	0.32	+0.2
2,489,716	+	srrA	Synpcc7942_2417	0.32	-0.7
2,489,716	-	srrA	Synpcc7942_2417	0.32	+1.4
2,489,792	+	srrA	Synpcc7942_2417	0.38	-0.8
2,489,800	-	srrA	Synpcc7942_2417	0.38	-0.3
2,489,832	-	srrA	Synpcc7942_2417	0.41	-1.0
2,489,880	+	srrA	Synpcc7942_2417	0.45	-0.3
2,489,883	+	srrA	Synpcc7942_2417	0.45	-0.4
2,489,883	-	srrA	Synpcc7942_2417	0.45	+1.3
2,489,897	-	srrA	Synpcc7942_2417	0.46	-2.4
2,489,905	-	srrA	Synpcc7942_2417	0.47	-1.6
2,489,917	+	srrA	Synpcc7942_2417	0.48	-0.3
2,489,919	+	srrA	Synpcc7942_2417	0.48	+3.2
2,489,925	-	srrA	Synpcc7942_2417	0.48	-2.4
2,489,944	+	srrA	Synpcc7942_2417	0.50	-0.3
2,489,944	+	srrA	Synpcc7942_2417	0.50	-0.9
2,489,944	+	srrA	Synpcc7942_2417	0.50	+1.0
2,489,961	+				+0.4
2,489,962	+	srrA	Synpcc7942_2417	0.51	-0.1
2,489,971	+	srrA	Synpcc7942_2417	0.52	-0.4
2,489,979	-	srrA	Synpcc7942_2417	0.53	-0.6
2,489,986	+	srrA	Synpcc7942_2417	0.53	-0.8
2,489,986	+	srrA	Synpcc7942_2417	0.53	-1.3
2,489,993	-	srrA	Synpcc7942_2417	0.54	-0.6
2,489,994	-	srrA	Synpcc7942_2417	0.54	-0.1
2,490,012	+	srrA	Synpcc7942_2417	0.55	-0.2
2,490,020	-	srrA	Synpcc7942_2417	0.56	-1.3
2,490,100	+	srrA	Synpcc7942_2417	0.62	-0.6
2,490,110	-	srrA	Synpcc7942_2417	0.63	-1.0