Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2102

Experiment: No grazer plate rep 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	No grazer plate rep 2
2,182,921	-				-0.5
2,182,968	-				-0.8
2,182,991	+				+0.6
2,182,991	+				+0.2
2,182,991	+				-0.6
2,182,999	-				+0.3
2,183,003	+				-0.4
2,183,005	+				+0.4
2,183,005	+				-0.7
2,183,013	-				-0.3
2,183,013	-				+0.2
2,183,046	-	rfbA	Synpcc7942_2101	0.12	+1.5
2,183,063	+	rfbA	Synpcc7942_2101	0.14	-1.7
2,183,115	+	rfbA	Synpcc7942_2101	0.20	-1.0
2,183,115	+	rfbA	Synpcc7942_2101	0.20	+0.0
2,183,115	+	rfbA	Synpcc7942_2101	0.20	+0.0
2,183,115	-	rfbA	Synpcc7942_2101	0.20	-0.2
2,183,115	-	rfbA	Synpcc7942_2101	0.20	+0.9
2,183,123	-	rfbA	Synpcc7942_2101	0.21	+1.0
2,183,123	-	rfbA	Synpcc7942_2101	0.21	-0.6
2,183,141	+	rfbA	Synpcc7942_2101	0.23	+0.5
2,183,177	+	rfbA	Synpcc7942_2101	0.27	-1.7
2,183,177	+	rfbA	Synpcc7942_2101	0.27	-0.5
2,183,207	-	rfbA	Synpcc7942_2101	0.30	-1.1
2,183,214	-	rfbA	Synpcc7942_2101	0.31	-0.2
2,183,238	+	rfbA	Synpcc7942_2101	0.34	-0.8
2,183,338	+	rfbA	Synpcc7942_2101	0.45	+0.6
2,183,383	-	rfbA	Synpcc7942_2101	0.50	-1.1
2,183,432	+	rfbA	Synpcc7942_2101	0.55	-1.6
2,183,432	+	rfbA	Synpcc7942_2101	0.55	-1.6
2,183,457	+	rfbA	Synpcc7942_2101	0.58	+1.0
2,183,466	+	rfbA	Synpcc7942_2101	0.59	+2.9
2,183,501	+	rfbA	Synpcc7942_2101	0.63	+1.6
2,183,513	-	rfbA	Synpcc7942_2101	0.65	+0.1
2,183,540	-	rfbA	Synpcc7942_2101	0.68	-0.7
2,183,549	+	rfbA	Synpcc7942_2101	0.69	-0.6
2,183,557	-	rfbA	Synpcc7942_2101	0.70	-0.2
2,183,574	+	rfbA	Synpcc7942_2101	0.72	-1.2
2,183,592	-	rfbA	Synpcc7942_2101	0.74	-0.2
2,183,609	+	rfbA	Synpcc7942_2101	0.75	-1.3
2,183,628	+	rfbA	Synpcc7942_2101	0.78	+1.9
2,183,628	+	rfbA	Synpcc7942_2101	0.78	+0.2
2,183,636	-	rfbA	Synpcc7942_2101	0.79	-0.1
2,183,636	-	rfbA	Synpcc7942_2101	0.79	+3.3
2,183,721	+	rfbA	Synpcc7942_2101	0.88	+1.5
2,183,740	-				-0.0
2,183,746	+				-1.0
2,183,754	-				-1.7
2,183,763	+				-1.0
2,183,771	-				-0.9
2,183,804	-				-1.1
2,183,813	-				-0.5
2,183,827	-				-1.1
2,183,841	+				-0.2
2,183,849	+				+0.9
2,183,849	-				-0.9
2,183,862	+		Synpcc7942_2102	0.10	-0.0
2,183,897	+		Synpcc7942_2102	0.25	+0.1
2,183,905	-		Synpcc7942_2102	0.28	-0.6
2,183,905	-		Synpcc7942_2102	0.28	-0.2
2,183,905	-		Synpcc7942_2102	0.28	-1.6
2,183,905	-		Synpcc7942_2102	0.28	-1.4
2,183,924	+		Synpcc7942_2102	0.36	-0.1
2,183,932	-		Synpcc7942_2102	0.40	-1.7
2,183,946	+		Synpcc7942_2102	0.45	+1.7
2,183,958	+		Synpcc7942_2102	0.50	+0.7
2,183,962	-		Synpcc7942_2102	0.52	-0.9
2,183,966	-		Synpcc7942_2102	0.54	-0.1
2,183,996	+		Synpcc7942_2102	0.66	+0.2
2,184,034	+		Synpcc7942_2102	0.82	-2.0
2,184,035	+		Synpcc7942_2102	0.82	-0.8
2,184,076	+				-1.3
2,184,097	-				+1.5
2,184,141	+				-0.7
2,184,168	+		Synpcc7942_2103	0.12	-2.6
2,184,170	-		Synpcc7942_2103	0.13	+0.2
2,184,176	-		Synpcc7942_2103	0.14	+0.1
2,184,186	-		Synpcc7942_2103	0.17	+0.2
2,184,225	-		Synpcc7942_2103	0.26	+0.9
2,184,305	-		Synpcc7942_2103	0.46	-1.3
2,184,324	+		Synpcc7942_2103	0.51	-0.6
2,184,335	+		Synpcc7942_2103	0.53	+0.1
2,184,345	+		Synpcc7942_2103	0.56	-1.2
2,184,353	+		Synpcc7942_2103	0.58	-1.3
2,184,408	-		Synpcc7942_2103	0.71	+0.0
2,184,426	+		Synpcc7942_2103	0.76	-1.1
2,184,434	-		Synpcc7942_2103	0.78	-2.3
2,184,468	-		Synpcc7942_2103	0.86	-0.1
2,184,518	+				+0.4
2,184,528	-				+3.6
2,184,562	+				+0.2
2,184,576	-				-0.1
2,184,604	+				+0.1
2,184,606	+				-0.2
2,184,606	+				+0.3
2,184,607	-				-0.9
2,184,612	-				+0.6
2,184,624	-				-1.2
2,184,624	-				-0.3
2,184,631	+				+0.5
2,184,634	-				+1.1
2,184,639	-				-1.2
2,184,696	+				-1.6
2,184,764	-				+0.1
2,184,764	-				+0.4
2,184,795	+	cynS	Synpcc7942_2104	0.12	-0.1
2,184,893	+	cynS	Synpcc7942_2104	0.35	+0.7
2,184,894	+	cynS	Synpcc7942_2104	0.35	-0.6
2,184,894	+	cynS	Synpcc7942_2104	0.35	-2.0
2,184,902	-	cynS	Synpcc7942_2104	0.37	+0.4
2,184,962	+	cynS	Synpcc7942_2104	0.50	-1.2
2,184,971	-	cynS	Synpcc7942_2104	0.52	+0.4
2,184,986	+	cynS	Synpcc7942_2104	0.56	+0.3
2,185,001	-	cynS	Synpcc7942_2104	0.59	-0.3
2,185,010	+	cynS	Synpcc7942_2104	0.61	+1.0