Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1691

Experiment: No grazer plate rep 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	No grazer plate rep 2
1,756,246	-	rhdA	Synpcc7942_1689	0.34	-1.0
1,756,256	+	rhdA	Synpcc7942_1689	0.35	-0.2
1,756,272	+	rhdA	Synpcc7942_1689	0.37	-0.7
1,756,272	+	rhdA	Synpcc7942_1689	0.37	+0.4
1,756,272	+	rhdA	Synpcc7942_1689	0.37	-1.7
1,756,280	-	rhdA	Synpcc7942_1689	0.38	+0.0
1,756,309	-	rhdA	Synpcc7942_1689	0.41	-0.6
1,756,352	-	rhdA	Synpcc7942_1689	0.45	-2.9
1,756,357	-	rhdA	Synpcc7942_1689	0.46	-2.9
1,756,357	-	rhdA	Synpcc7942_1689	0.46	-0.5
1,756,370	+	rhdA	Synpcc7942_1689	0.47	-2.1
1,756,379	+	rhdA	Synpcc7942_1689	0.48	+0.5
1,756,379	-	rhdA	Synpcc7942_1689	0.48	+2.1
1,756,380	+	rhdA	Synpcc7942_1689	0.48	+0.3
1,756,380	+	rhdA	Synpcc7942_1689	0.48	-0.8
1,756,380	+	rhdA	Synpcc7942_1689	0.48	-1.0
1,756,380	+	rhdA	Synpcc7942_1689	0.48	-0.9
1,756,388	-	rhdA	Synpcc7942_1689	0.49	-1.3
1,756,388	-	rhdA	Synpcc7942_1689	0.49	+1.2
1,756,388	-	rhdA	Synpcc7942_1689	0.49	+0.3
1,756,396	+	rhdA	Synpcc7942_1689	0.50	+1.1
1,756,415	+	rhdA	Synpcc7942_1689	0.52	+1.0
1,756,457	-	rhdA	Synpcc7942_1689	0.56	+2.1
1,756,459	-	rhdA	Synpcc7942_1689	0.56	-0.5
1,756,491	-	rhdA	Synpcc7942_1689	0.60	-1.6
1,756,493	-	rhdA	Synpcc7942_1689	0.60	-0.1
1,756,538	+	rhdA	Synpcc7942_1689	0.65	+0.4
1,756,538	+	rhdA	Synpcc7942_1689	0.65	+2.5
1,756,538	+	rhdA	Synpcc7942_1689	0.65	-2.3
1,756,585	-	rhdA	Synpcc7942_1689	0.70	+0.9
1,756,657	+	rhdA	Synpcc7942_1689	0.77	-0.7
1,756,669	+	rhdA	Synpcc7942_1689	0.78	-0.3
1,756,677	-	rhdA	Synpcc7942_1689	0.79	-2.2
1,756,677	-	rhdA	Synpcc7942_1689	0.79	-0.2
1,756,702	+	rhdA	Synpcc7942_1689	0.82	-1.8
1,756,758	+	rhdA	Synpcc7942_1689	0.88	+0.5
1,756,773	+	rhdA	Synpcc7942_1689	0.89	-0.6
1,756,784	+				-0.2
1,756,817	+				-0.1
1,756,817	+				-1.8
1,756,817	+				+0.8
1,756,817	+				+0.9
1,756,817	+				-0.6
1,756,817	+				+1.0
1,756,825	-				+0.4
1,756,825	-				+1.5
1,756,825	-				+0.2
1,756,825	-				-0.1
1,756,827	+				-0.8
1,756,871	+				-1.4
1,756,912	-				-2.0
1,756,943	-		Synpcc7942_1690	0.19	+0.7
1,757,024	+		Synpcc7942_1690	0.53	-0.9
1,757,027	+		Synpcc7942_1690	0.54	-1.2
1,757,027	-		Synpcc7942_1690	0.54	+0.1
1,757,034	+		Synpcc7942_1690	0.57	+0.3
1,757,035	-		Synpcc7942_1690	0.57	-0.1
1,757,039	+		Synpcc7942_1690	0.59	+0.7
1,757,039	+		Synpcc7942_1690	0.59	-0.5
1,757,045	+		Synpcc7942_1690	0.61	-1.2
1,757,051	+		Synpcc7942_1690	0.64	-1.3
1,757,084	-		Synpcc7942_1690	0.78	-1.5
1,757,096	+		Synpcc7942_1690	0.82	-0.4
1,757,096	+		Synpcc7942_1690	0.82	-1.0
1,757,096	+		Synpcc7942_1690	0.82	+0.6
1,757,104	-		Synpcc7942_1690	0.86	-1.5
1,757,106	+		Synpcc7942_1690	0.87	-2.2
1,757,114	-				-0.3
1,757,119	-				+0.9
1,757,122	+				+1.0
1,757,122	+				-0.8
1,757,122	+				-1.0
1,757,122	+				+1.0
1,757,130	-				+1.3
1,757,152	+				+0.0
1,757,152	+				-0.1
1,757,152	+				-2.5
1,757,152	+				+0.2
1,757,152	+				+0.9
1,757,152	+				-0.2
1,757,152	+				-1.0
1,757,152	+				-0.5
1,757,152	+				-0.2
1,757,160	-				-2.3
1,757,160	-				-0.4
1,757,160	-				-0.3
1,757,160	-				+0.5
1,757,160	-				-0.5
1,757,160	-				-0.7
1,757,160	-				-0.4
1,757,160	-				-1.4
1,757,160	-				-1.7
1,757,168	-				+0.6
1,757,177	+				+0.9
1,757,195	-				-1.2
1,757,205	-				-1.3
1,757,207	+				+0.7
1,757,209	+				+0.0
1,757,220	-				+1.6
1,757,260	+				+0.4
1,757,260	+				-2.6
1,757,268	-				+0.8
1,757,292	-		Synpcc7942_1691	0.12	+0.0
1,757,315	-		Synpcc7942_1691	0.14	+1.7
1,757,333	+		Synpcc7942_1691	0.15	-0.1
1,757,346	-		Synpcc7942_1691	0.16	-1.4
1,757,348	-		Synpcc7942_1691	0.17	-0.9
1,757,362	+		Synpcc7942_1691	0.18	-1.7
1,757,362	+				+0.5
1,757,370	+		Synpcc7942_1691	0.19	-0.1
1,757,370	-				+1.0
1,757,387	-		Synpcc7942_1691	0.20	+0.5
1,757,408	-		Synpcc7942_1691	0.22	+0.3
1,757,408	-		Synpcc7942_1691	0.22	-0.5
1,757,413	+		Synpcc7942_1691	0.22	-0.2
1,757,465	-		Synpcc7942_1691	0.27	-1.2
1,757,472	+		Synpcc7942_1691	0.27	-0.6
1,757,486	-		Synpcc7942_1691	0.29	-1.0
1,757,496	+		Synpcc7942_1691	0.29	-0.5
1,757,501	+		Synpcc7942_1691	0.30	+0.7
1,757,504	-		Synpcc7942_1691	0.30	-0.3
1,757,509	-		Synpcc7942_1691	0.30	+0.5
1,757,509	-		Synpcc7942_1691	0.30	+0.9
1,757,509	-		Synpcc7942_1691	0.30	+0.4
1,757,514	-		Synpcc7942_1691	0.31	-1.4
1,757,544	+		Synpcc7942_1691	0.34	+0.7
1,757,553	+		Synpcc7942_1691	0.34	-1.5
1,757,601	+		Synpcc7942_1691	0.38	-0.8
1,757,602	+		Synpcc7942_1691	0.39	-0.8
1,757,610	-		Synpcc7942_1691	0.39	+0.2
1,757,610	-		Synpcc7942_1691	0.39	-1.0
1,757,647	+		Synpcc7942_1691	0.42	+0.3
1,757,647	+		Synpcc7942_1691	0.42	-1.7
1,757,659	-		Synpcc7942_1691	0.43	-0.4
1,757,712	+		Synpcc7942_1691	0.48	+0.4
1,757,718	+		Synpcc7942_1691	0.48	-1.5
1,757,718	+		Synpcc7942_1691	0.48	-1.9
1,757,718	+		Synpcc7942_1691	0.48	+0.8
1,757,726	-				+0.6
1,757,726	-		Synpcc7942_1691	0.49	-0.5
1,757,728	-		Synpcc7942_1691	0.49	-1.1
1,757,758	-		Synpcc7942_1691	0.52	-0.6
1,757,758	-		Synpcc7942_1691	0.52	-1.5
1,757,778	-				+1.0
1,757,841	+		Synpcc7942_1691	0.59	-0.5
1,757,841	+		Synpcc7942_1691	0.59	-0.5
1,757,841	+		Synpcc7942_1691	0.59	-0.1
1,757,841	+		Synpcc7942_1691	0.59	-1.0
1,757,841	+		Synpcc7942_1691	0.59	-2.5
1,757,848	+		Synpcc7942_1691	0.60	-0.6
1,757,849	-		Synpcc7942_1691	0.60	-0.2
1,757,849	-		Synpcc7942_1691	0.60	-1.7
1,757,849	-				-0.5
1,757,849	-		Synpcc7942_1691	0.60	-1.0
1,757,849	-		Synpcc7942_1691	0.60	-0.5
1,757,849	-		Synpcc7942_1691	0.60	+0.0
1,757,849	-		Synpcc7942_1691	0.60	+0.4
1,757,849	-		Synpcc7942_1691	0.60	+0.2
1,757,855	+		Synpcc7942_1691	0.60	+0.9
1,757,871	-		Synpcc7942_1691	0.62	-0.4
1,757,874	+		Synpcc7942_1691	0.62	+0.1
1,757,882	-		Synpcc7942_1691	0.63	-0.4
1,757,886	+		Synpcc7942_1691	0.63	+1.9
1,757,887	+		Synpcc7942_1691	0.63	-0.7
1,757,887	+		Synpcc7942_1691	0.63	-1.2
1,757,896	-		Synpcc7942_1691	0.64	-0.4
1,757,897	+		Synpcc7942_1691	0.64	-0.9
1,757,899	+		Synpcc7942_1691	0.64	-1.2
1,757,899	+		Synpcc7942_1691	0.64	+0.0
1,757,899	+		Synpcc7942_1691	0.64	-0.0
1,757,899	+		Synpcc7942_1691	0.64	-0.1
1,757,907	-		Synpcc7942_1691	0.65	+0.3
1,757,907	-		Synpcc7942_1691	0.65	-1.8
1,757,907	-		Synpcc7942_1691	0.65	-0.9
1,757,928	-		Synpcc7942_1691	0.67	+0.2
1,757,941	+		Synpcc7942_1691	0.68	+0.6
1,757,941	+		Synpcc7942_1691	0.68	-0.1
1,757,949	-		Synpcc7942_1691	0.68	-0.3
1,757,949	-		Synpcc7942_1691	0.68	+1.7
1,758,003	+		Synpcc7942_1691	0.73	-0.1
1,758,011	-		Synpcc7942_1691	0.74	+2.0
1,758,011	-		Synpcc7942_1691	0.74	-1.2
1,758,038	-		Synpcc7942_1691	0.76	-1.4
1,758,049	+		Synpcc7942_1691	0.77	-1.8
1,758,075	-		Synpcc7942_1691	0.79	-0.5
1,758,088	+		Synpcc7942_1691	0.80	+0.8
1,758,088	+		Synpcc7942_1691	0.80	-0.3
1,758,088	+		Synpcc7942_1691	0.80	-1.1
1,758,096	-		Synpcc7942_1691	0.81	-1.0
1,758,096	-		Synpcc7942_1691	0.81	-0.1
1,758,109	-		Synpcc7942_1691	0.82	+0.0
1,758,121	+		Synpcc7942_1691	0.83	+0.7
1,758,129	+		Synpcc7942_1691	0.84	-0.0
1,758,131	+		Synpcc7942_1691	0.84	+0.4
1,758,135	+		Synpcc7942_1691	0.84	+0.5
1,758,137	-		Synpcc7942_1691	0.85	+1.9
1,758,138	-		Synpcc7942_1691	0.85	-0.7
1,758,143	-		Synpcc7942_1691	0.85	-1.6
1,758,188	+		Synpcc7942_1691	0.89	-0.9
1,758,188	+		Synpcc7942_1691	0.89	-1.4
1,758,188	+		Synpcc7942_1691	0.89	+0.0
1,758,201	-				+0.5
1,758,216	+				+0.2
1,758,219	-				-1.6
1,758,237	+				-1.3
1,758,243	-				-1.5
1,758,243	-				+0.6
1,758,243	-				+0.0
1,758,295	+				-2.6
1,758,329	-				-1.4
1,758,367	-				-2.0
1,758,390	-				-0.1
1,758,390	-				+0.3
1,758,621	-		Synpcc7942_1692	0.22	-1.6
1,758,774	-		Synpcc7942_1692	0.39	-3.0
1,758,799	+		Synpcc7942_1692	0.42	+1.5
1,758,799	+		Synpcc7942_1692	0.42	-0.3
1,758,799	+		Synpcc7942_1692	0.42	+0.0
1,758,814	-		Synpcc7942_1692	0.43	-1.4
1,758,861	-		Synpcc7942_1692	0.49	-0.8
1,759,020	+		Synpcc7942_1692	0.66	-3.2
1,759,028	-		Synpcc7942_1692	0.67	+0.8
1,759,065	+		Synpcc7942_1692	0.71	-0.3
1,759,073	-		Synpcc7942_1692	0.72	+0.8
1,759,192	+		Synpcc7942_1692	0.85	-1.4
1,759,194	-		Synpcc7942_1692	0.85	-1.3
1,759,200	-		Synpcc7942_1692	0.86	-0.7
1,759,299	+				-1.1
1,759,299	+				-1.1
1,759,307	-				-1.8