Experiment: MoYLS4 media with NH4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2663 and DvMF_2664 are separated by 664 nucleotides DvMF_2664 and DvMF_2665 are separated by 129 nucleotides
DvMF_2663: DvMF_2663 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 3,363,574 to 3,365,157
_2663
DvMF_2664: DvMF_2664 - PDZ/DHR/GLGF domain protein (RefSeq), at 3,365,822 to 3,367,024
_2664
DvMF_2665: DvMF_2665 - hypothetical protein (RefSeq), at 3,367,154 to 3,368,788
_2665
Position (kb)
3365
3366
3367
3368 Strain fitness (log2 ratio)
-2
-1
0
1 at 3365.080 kb on - strand at 3365.152 kb on + strand at 3365.152 kb on + strand at 3365.236 kb on + strand at 3365.334 kb on - strand at 3365.334 kb on - strand at 3365.369 kb on - strand at 3365.435 kb on - strand at 3365.814 kb on + strand at 3366.051 kb on + strand, within DvMF_2664 at 3366.057 kb on - strand, within DvMF_2664 at 3366.168 kb on - strand, within DvMF_2664 at 3366.255 kb on - strand, within DvMF_2664 at 3366.406 kb on + strand, within DvMF_2664 at 3366.414 kb on - strand, within DvMF_2664 at 3366.414 kb on - strand, within DvMF_2664 at 3366.483 kb on + strand, within DvMF_2664 at 3366.667 kb on + strand, within DvMF_2664 at 3366.675 kb on - strand, within DvMF_2664 at 3366.738 kb on + strand, within DvMF_2664 at 3366.811 kb on - strand, within DvMF_2664 at 3366.816 kb on - strand, within DvMF_2664 at 3366.846 kb on - strand, within DvMF_2664 at 3367.070 kb on - strand at 3367.431 kb on + strand, within DvMF_2665 at 3367.953 kb on - strand, within DvMF_2665 at 3367.953 kb on - strand, within DvMF_2665
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media with NH4 remove 3,365,080 - -0.8 3,365,152 + -1.0 3,365,152 + -0.4 3,365,236 + -0.6 3,365,334 - -0.4 3,365,334 - -0.2 3,365,369 - -0.2 3,365,435 - -0.3 3,365,814 + -0.3 3,366,051 + DvMF_2664 0.19 -0.5 3,366,057 - DvMF_2664 0.20 -0.3 3,366,168 - DvMF_2664 0.29 +0.5 3,366,255 - DvMF_2664 0.36 -0.5 3,366,406 + DvMF_2664 0.49 -0.1 3,366,414 - DvMF_2664 0.49 +1.1 3,366,414 - DvMF_2664 0.49 -0.6 3,366,483 + DvMF_2664 0.55 -0.5 3,366,667 + DvMF_2664 0.70 -0.1 3,366,675 - DvMF_2664 0.71 -1.8 3,366,738 + DvMF_2664 0.76 -0.6 3,366,811 - DvMF_2664 0.82 -0.2 3,366,816 - DvMF_2664 0.83 -0.0 3,366,846 - DvMF_2664 0.85 -1.2 3,367,070 - -0.5 3,367,431 + DvMF_2665 0.17 -1.2 3,367,953 - DvMF_2665 0.49 -0.3 3,367,953 - DvMF_2665 0.49 -1.4
Or see this region's nucleotide sequence