Experiment: MoYLS4 media with NH4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1694 and DvMF_1695 are separated by 2 nucleotides DvMF_1695 and DvMF_1696 are separated by 432 nucleotides
DvMF_1694: DvMF_1694 - cytochrome c family protein (RefSeq), at 2,064,128 to 2,065,822
_1694
DvMF_1695: DvMF_1695 - cytochrome B561 (RefSeq), at 2,065,825 to 2,066,454
_1695
DvMF_1696: DvMF_1696 - Phosphoglycerate mutase (RefSeq), at 2,066,887 to 2,068,095
_1696
Position (kb)
2065
2066
2067 Strain fitness (log2 ratio)
-1
0
1 at 2064.951 kb on + strand, within DvMF_1694 at 2064.951 kb on + strand, within DvMF_1694 at 2064.959 kb on - strand, within DvMF_1694 at 2064.959 kb on - strand, within DvMF_1694 at 2065.106 kb on + strand, within DvMF_1694 at 2065.177 kb on + strand, within DvMF_1694 at 2065.482 kb on - strand, within DvMF_1694 at 2065.590 kb on - strand, within DvMF_1694 at 2065.877 kb on - strand at 2065.936 kb on + strand, within DvMF_1695 at 2066.005 kb on + strand, within DvMF_1695 at 2066.077 kb on - strand, within DvMF_1695 at 2066.132 kb on - strand, within DvMF_1695 at 2066.132 kb on - strand, within DvMF_1695 at 2066.287 kb on - strand, within DvMF_1695 at 2066.374 kb on - strand, within DvMF_1695 at 2066.376 kb on + strand, within DvMF_1695 at 2066.459 kb on - strand at 2066.570 kb on - strand at 2066.835 kb on - strand at 2066.879 kb on + strand at 2067.119 kb on - strand, within DvMF_1696 at 2067.119 kb on - strand, within DvMF_1696 at 2067.124 kb on - strand, within DvMF_1696 at 2067.239 kb on - strand, within DvMF_1696 at 2067.380 kb on + strand, within DvMF_1696 at 2067.380 kb on + strand, within DvMF_1696
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media with NH4 remove 2,064,951 + DvMF_1694 0.49 -1.4 2,064,951 + DvMF_1694 0.49 -0.5 2,064,959 - DvMF_1694 0.49 -0.4 2,064,959 - DvMF_1694 0.49 +0.1 2,065,106 + DvMF_1694 0.58 -0.8 2,065,177 + DvMF_1694 0.62 -0.3 2,065,482 - DvMF_1694 0.80 +0.6 2,065,590 - DvMF_1694 0.86 -0.4 2,065,877 - -0.6 2,065,936 + DvMF_1695 0.18 +0.4 2,066,005 + DvMF_1695 0.29 -0.2 2,066,077 - DvMF_1695 0.40 -0.4 2,066,132 - DvMF_1695 0.49 -0.9 2,066,132 - DvMF_1695 0.49 -0.2 2,066,287 - DvMF_1695 0.73 -0.7 2,066,374 - DvMF_1695 0.87 -0.6 2,066,376 + DvMF_1695 0.87 -0.8 2,066,459 - -0.2 2,066,570 - +0.6 2,066,835 - -0.7 2,066,879 + -0.2 2,067,119 - DvMF_1696 0.19 -0.7 2,067,119 - DvMF_1696 0.19 -0.5 2,067,124 - DvMF_1696 0.20 -0.7 2,067,239 - DvMF_1696 0.29 -0.8 2,067,380 + DvMF_1696 0.41 -0.3 2,067,380 + DvMF_1696 0.41 -0.6
Or see this region's nucleotide sequence