Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2573

Experiment: No grazer plate rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	No grazer plate rep 1
2,651,570	-	mrcA	Synpcc7942_2571	0.78	+0.6
2,651,577	+	mrcA	Synpcc7942_2571	0.79	-1.0
2,651,599	+	mrcA	Synpcc7942_2571	0.80	-1.4
2,651,612	+	mrcA	Synpcc7942_2571	0.80	+1.1
2,651,612	+	mrcA	Synpcc7942_2571	0.80	-3.5
2,651,614	-	mrcA	Synpcc7942_2571	0.81	+0.4
2,651,614	-	mrcA	Synpcc7942_2571	0.81	+1.1
2,651,627	+	mrcA	Synpcc7942_2571	0.81	-3.1
2,651,629	+	mrcA	Synpcc7942_2571	0.81	+0.6
2,651,678	-	mrcA	Synpcc7942_2571	0.84	+4.6
2,651,682	+	mrcA	Synpcc7942_2571	0.84	-0.8
2,651,682	+	mrcA	Synpcc7942_2571	0.84	-0.6
2,651,682	-	mrcA	Synpcc7942_2571	0.84	+1.0
2,651,696	-	mrcA	Synpcc7942_2571	0.85	-0.8
2,651,702	-	mrcA	Synpcc7942_2571	0.85	+0.7
2,651,739	+	mrcA	Synpcc7942_2571	0.87	-1.5
2,651,747	-	mrcA	Synpcc7942_2571	0.88	-1.6
2,651,747	-	mrcA	Synpcc7942_2571	0.88	+0.9
2,651,762	-	mrcA	Synpcc7942_2571	0.88	-1.2
2,651,810	+				+0.7
2,651,825	+				+0.6
2,651,825	-				-1.4
2,651,853	-				-0.6
2,651,950	-				+1.4
2,651,995	-				+0.5
2,652,114	+		Synpcc7942_2572	0.17	-1.8
2,652,361	-				-0.5
2,652,387	-				+1.2
2,652,387	-				-1.5
2,652,551	+				-0.6
2,652,712	+	mntB	Synpcc7942_2573	0.24	-2.3
2,652,807	+	mntB	Synpcc7942_2573	0.35	-0.9
2,652,814	-	mntB	Synpcc7942_2573	0.36	-1.5
2,652,814	-	mntB	Synpcc7942_2573	0.36	-0.2
2,652,873	-	mntB	Synpcc7942_2573	0.43	-2.1
2,652,913	+	mntB	Synpcc7942_2573	0.48	-1.7
2,653,086	-	mntB	Synpcc7942_2573	0.69	-0.4
2,653,123	+	mntB	Synpcc7942_2573	0.73	-0.9
2,653,131	-	mntB	Synpcc7942_2573	0.74	-0.6
2,653,284	-				+0.5
2,653,341	-				+2.5
2,653,343	+				-0.5
2,653,384	+				+0.6
2,653,384	+				-1.9
2,653,384	+				+0.3
2,653,389	+				-0.0
2,653,392	-				-0.3
2,653,458	-	mntA	Synpcc7942_2574	0.15	-1.5
2,653,671	-	mntA	Synpcc7942_2574	0.43	+0.3
2,653,716	+	mntA	Synpcc7942_2574	0.49	-1.2
2,653,733	-	mntA	Synpcc7942_2574	0.51	-0.1
2,653,734	-	mntA	Synpcc7942_2574	0.51	-0.7
2,653,884	+	mntA	Synpcc7942_2574	0.71	-1.5
2,653,924	+	mntA	Synpcc7942_2574	0.76	-0.3
2,653,927	-	mntA	Synpcc7942_2574	0.77	-0.7
2,653,994	-	mntA	Synpcc7942_2574	0.86	-1.5
2,654,015	-	mntA	Synpcc7942_2574	0.88	-1.5
2,654,050	-				-1.8
2,654,105	+				+0.3
2,654,203	+				-0.5
2,654,217	-				-0.4
2,654,263	+	mntC	Synpcc7942_2575	0.11	-1.3
2,654,293	+	mntC	Synpcc7942_2575	0.14	-1.2
2,654,308	+	mntC	Synpcc7942_2575	0.15	-1.3