Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1228

Experiment: No grazer plate rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	No grazer plate rep 1
1,248,374	+				-0.1
1,248,377	-				-0.4
1,248,428	-				+0.4
1,248,437	+				+0.1
1,248,437	+				+1.0
1,248,439	+				-0.1
1,248,439	+				-0.8
1,248,549	+				-0.3
1,248,602	-				-1.5
1,248,630	-				-1.0
1,248,682	+	radC	Synpcc7942_1227	0.12	-1.5
1,248,697	-	radC	Synpcc7942_1227	0.14	-0.6
1,248,697	-	radC	Synpcc7942_1227	0.14	+0.2
1,248,715	+	radC	Synpcc7942_1227	0.17	-1.2
1,248,738	+	radC	Synpcc7942_1227	0.20	-1.0
1,248,743	+	radC	Synpcc7942_1227	0.20	-0.5
1,248,751	-	radC	Synpcc7942_1227	0.21	-1.3
1,248,760	-	radC	Synpcc7942_1227	0.23	+1.9
1,248,765	-	radC	Synpcc7942_1227	0.23	+1.0
1,248,765	-	radC	Synpcc7942_1227	0.23	-1.2
1,248,770	+	radC	Synpcc7942_1227	0.24	+0.5
1,248,770	+	radC	Synpcc7942_1227	0.24	-0.1
1,248,770	-	radC	Synpcc7942_1227	0.24	+0.3
1,248,778	-	radC	Synpcc7942_1227	0.25	-0.3
1,248,778	-	radC	Synpcc7942_1227	0.25	-1.9
1,248,789	-	radC	Synpcc7942_1227	0.27	-1.6
1,248,795	+	radC	Synpcc7942_1227	0.27	-0.7
1,248,803	+	radC	Synpcc7942_1227	0.29	-1.5
1,248,803	+	radC	Synpcc7942_1227	0.29	+1.1
1,248,803	+	radC	Synpcc7942_1227	0.29	-0.7
1,248,803	+	radC	Synpcc7942_1227	0.29	-0.9
1,248,803	+	radC	Synpcc7942_1227	0.29	+0.9
1,248,810	-	radC	Synpcc7942_1227	0.30	-0.7
1,248,811	-	radC	Synpcc7942_1227	0.30	-0.5
1,248,811	-	radC	Synpcc7942_1227	0.30	-0.4
1,248,811	-	radC	Synpcc7942_1227	0.30	-1.4
1,248,811	-	radC	Synpcc7942_1227	0.30	+1.1
1,248,879	+	radC	Synpcc7942_1227	0.39	-1.2
1,248,879	+	radC	Synpcc7942_1227	0.39	-0.7
1,248,887	-	radC	Synpcc7942_1227	0.40	-0.3
1,248,893	-				-1.8
1,248,908	-	radC	Synpcc7942_1227	0.43	+0.5
1,248,913	+	radC	Synpcc7942_1227	0.44	-1.4
1,248,933	+	radC	Synpcc7942_1227	0.46	+0.9
1,248,938	+	radC	Synpcc7942_1227	0.47	-0.2
1,248,941	-	radC	Synpcc7942_1227	0.47	-0.3
1,248,946	-	radC	Synpcc7942_1227	0.48	-0.0
1,248,948	+	radC	Synpcc7942_1227	0.48	+0.2
1,248,959	-	radC	Synpcc7942_1227	0.50	+2.6
1,248,992	-	radC	Synpcc7942_1227	0.54	+1.3
1,249,006	+	radC	Synpcc7942_1227	0.56	-0.8
1,249,068	-	radC	Synpcc7942_1227	0.65	-0.6
1,249,069	-	radC	Synpcc7942_1227	0.65	-1.4
1,249,116	+	radC	Synpcc7942_1227	0.71	+1.2
1,249,118	+	radC	Synpcc7942_1227	0.71	-0.8
1,249,136	+	radC	Synpcc7942_1227	0.74	-1.6
1,249,140	+	radC	Synpcc7942_1227	0.74	+1.2
1,249,144	-	radC	Synpcc7942_1227	0.75	+0.4
1,249,148	-	radC	Synpcc7942_1227	0.76	+0.7
1,249,168	-	radC	Synpcc7942_1227	0.78	+0.8
1,249,171	+	radC	Synpcc7942_1227	0.79	+1.5
1,249,195	+	radC	Synpcc7942_1227	0.82	+0.3
1,249,228	+	radC	Synpcc7942_1227	0.86	+1.1
1,249,251	+	radC	Synpcc7942_1227	0.90	-1.0
1,249,270	-				-0.6
1,249,270	-				+0.4
1,249,270	-				-0.9
1,249,312	+				+1.0
1,249,322	+				+0.7
1,249,355	-				-0.3
1,249,410	+				-0.6
1,249,410	+				-0.4
1,249,418	-				-2.2
1,249,478	+		Synpcc7942_1228	0.14	+1.1
1,249,478	+		Synpcc7942_1228	0.14	+1.6
1,249,481	-		Synpcc7942_1228	0.14	-1.8
1,249,491	-		Synpcc7942_1228	0.16	-1.8
1,249,499	+		Synpcc7942_1228	0.17	-0.9
1,249,499	+		Synpcc7942_1228	0.17	-1.4
1,249,507	-		Synpcc7942_1228	0.17	+0.2
1,249,507	-		Synpcc7942_1228	0.17	+1.9
1,249,554	+		Synpcc7942_1228	0.23	+1.1
1,249,599	+		Synpcc7942_1228	0.28	+1.1
1,249,611	+				+2.1
1,249,611	+		Synpcc7942_1228	0.29	+1.5
1,249,614	-		Synpcc7942_1228	0.30	+1.0
1,249,630	-		Synpcc7942_1228	0.32	+2.9
1,249,670	+		Synpcc7942_1228	0.36	+0.2
1,249,687	-		Synpcc7942_1228	0.38	+0.2
1,249,749	-		Synpcc7942_1228	0.45	-1.7
1,249,821	-		Synpcc7942_1228	0.54	+0.4
1,249,906	+		Synpcc7942_1228	0.63	+0.7
1,249,908	+		Synpcc7942_1228	0.64	-1.5
1,249,943	-		Synpcc7942_1228	0.68	+1.1
1,249,980	+		Synpcc7942_1228	0.72	-2.4
1,249,980	+		Synpcc7942_1228	0.72	+1.1
1,249,980	+		Synpcc7942_1228	0.72	-0.5
1,249,988	-		Synpcc7942_1228	0.73	-1.0
1,249,988	-		Synpcc7942_1228	0.73	+0.2
1,249,988	-		Synpcc7942_1228	0.73	+0.5
1,249,989	-		Synpcc7942_1228	0.73	-0.8
1,250,014	+		Synpcc7942_1228	0.76	+0.3
1,250,022	-		Synpcc7942_1228	0.77	+3.7
1,250,030	+		Synpcc7942_1228	0.78	-1.4
1,250,038	-		Synpcc7942_1228	0.79	+0.1
1,250,073	+		Synpcc7942_1228	0.83	-1.3
1,250,087	+		Synpcc7942_1228	0.84	+1.2
1,250,110	+		Synpcc7942_1228	0.87	-0.3
1,250,132	+		Synpcc7942_1228	0.89	+0.5
1,250,189	+				+0.0
1,250,974	+				+0.0
1,250,997	-				-0.8
1,251,069	+	lgt	Synpcc7942_1230	0.11	-0.7
1,251,077	-	lgt	Synpcc7942_1230	0.11	+0.2
1,251,077	-	lgt	Synpcc7942_1230	0.11	-0.8
1,251,077	-	lgt	Synpcc7942_1230	0.11	+0.7
1,251,077	-	lgt	Synpcc7942_1230	0.11	+0.7
1,251,077	-	lgt	Synpcc7942_1230	0.11	-2.6