Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0114

Experiment: No grazer plate rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	No grazer plate rep 1
112,443	+	phr	Synpcc7942_0112	0.52	+0.4
112,451	-	phr	Synpcc7942_0112	0.53	-1.6
112,455	-	phr	Synpcc7942_0112	0.53	-2.0
112,456	-	phr	Synpcc7942_0112	0.53	+1.0
112,470	+	phr	Synpcc7942_0112	0.54	-3.0
112,470	+	phr	Synpcc7942_0112	0.54	-0.8
112,470	+	phr	Synpcc7942_0112	0.54	-2.3
112,473	-	phr	Synpcc7942_0112	0.54	-0.1
112,475	+	phr	Synpcc7942_0112	0.54	+0.7
112,481	+	phr	Synpcc7942_0112	0.55	+0.6
112,489	-	phr	Synpcc7942_0112	0.55	+1.4
112,494	+	phr	Synpcc7942_0112	0.56	-0.9
112,502	+	phr	Synpcc7942_0112	0.56	-2.1
112,512	+	phr	Synpcc7942_0112	0.57	-0.4
112,556	-	phr	Synpcc7942_0112	0.60	+0.2
112,575	+	phr	Synpcc7942_0112	0.61	-0.1
112,600	-	phr	Synpcc7942_0112	0.63	-1.5
112,640	+	phr	Synpcc7942_0112	0.66	+0.3
112,645	+	phr	Synpcc7942_0112	0.66	-0.9
112,645	+	phr	Synpcc7942_0112	0.66	-1.3
112,648	-	phr	Synpcc7942_0112	0.66	-0.4
112,652	+	phr	Synpcc7942_0112	0.66	+0.4
112,652	+	phr	Synpcc7942_0112	0.66	-1.0
112,652	+	phr	Synpcc7942_0112	0.66	-0.3
112,652	+	phr	Synpcc7942_0112	0.66	-1.8
112,652	+	phr	Synpcc7942_0112	0.66	+0.6
112,652	+	phr	Synpcc7942_0112	0.66	-1.1
112,653	-	phr	Synpcc7942_0112	0.66	-0.4
112,660	-	phr	Synpcc7942_0112	0.67	+0.4
112,660	-	phr	Synpcc7942_0112	0.67	-0.2
112,660	-	phr	Synpcc7942_0112	0.67	-1.3
112,660	-	phr	Synpcc7942_0112	0.67	-0.1
112,724	+	phr	Synpcc7942_0112	0.71	-0.5
112,762	+	phr	Synpcc7942_0112	0.74	-1.2
112,764	-	phr	Synpcc7942_0112	0.74	+0.6
112,776	-	phr	Synpcc7942_0112	0.75	+4.7
112,791	+	phr	Synpcc7942_0112	0.76	-1.4
112,811	-	phr	Synpcc7942_0112	0.77	+0.6
112,821	-	phr	Synpcc7942_0112	0.78	+0.3
112,821	-	phr	Synpcc7942_0112	0.78	-0.9
112,827	-	phr	Synpcc7942_0112	0.78	-1.7
112,859	-	phr	Synpcc7942_0112	0.81	-1.4
112,865	+	phr	Synpcc7942_0112	0.81	+1.4
112,889	-	phr	Synpcc7942_0112	0.83	-1.3
112,890	-	phr	Synpcc7942_0112	0.83	-1.1
112,927	+	phr	Synpcc7942_0112	0.85	-1.2
112,927	+	phr	Synpcc7942_0112	0.85	+0.4
112,944	-	phr	Synpcc7942_0112	0.86	+0.2
112,980	-	phr	Synpcc7942_0112	0.89	-1.9
112,987	-	phr	Synpcc7942_0112	0.89	+0.9
112,991	+	phr	Synpcc7942_0112	0.90	-2.9
112,991	+				-0.5
112,993	+	phr	Synpcc7942_0112	0.90	+0.1
112,999	-				+0.2
113,009	-				+1.9
113,009	-				-0.6
113,029	+				+0.1
113,042	-				-0.3
113,042	-				-1.3
113,052	+				+1.1
113,052	+				+0.4
113,074	+				+0.1
113,074	+				+1.9
113,074	+				-1.4
113,082	-				+0.3
113,082	-				-2.2
113,082	-				-0.7
113,084	+				+0.6
113,084	+				-1.3
113,103	-				+0.6
113,103	-				-0.4
113,116	+				-0.1
113,116	+				+1.0
113,117	+				-0.4
113,122	+				-1.1
113,124	-				+0.1
113,124	-				-0.7
113,124	-				-0.3
113,124	-				-0.5
113,130	-				+0.6
113,133	+				-1.9
113,141	-				+1.1
113,183	-				-0.6
113,265	-	petL	Synpcc7942_0113	0.74	-0.7
113,265	-	petL	Synpcc7942_0113	0.74	+0.3
113,267	+	petL	Synpcc7942_0113	0.76	+0.0
113,272	+	petL	Synpcc7942_0113	0.82	-0.5
113,282	+				+0.6
113,290	-				-2.0
113,290	-				+0.6
113,297	+				+0.8
113,297	+				-0.1
113,297	+				+0.6
113,305	-				-0.3
113,305	-				-0.7
113,305	-				-0.5
113,305	-				-1.5
113,345	-				+0.3
113,374	+		Synpcc7942_0114	0.13	+1.2
113,425	-		Synpcc7942_0114	0.26	+0.9
113,445	-		Synpcc7942_0114	0.32	-1.6
113,461	+		Synpcc7942_0114	0.36	-2.6
113,478	+		Synpcc7942_0114	0.41	-0.0
113,478	+				-0.9
113,486	-		Synpcc7942_0114	0.43	-0.2
113,486	-		Synpcc7942_0114	0.43	+1.1
113,530	-		Synpcc7942_0114	0.55	-1.2
113,530	-		Synpcc7942_0114	0.55	-0.1
113,530	-		Synpcc7942_0114	0.55	-1.4
113,535	-		Synpcc7942_0114	0.56	+0.6
113,535	-		Synpcc7942_0114	0.56	+0.2
113,590	+		Synpcc7942_0114	0.71	-1.3
113,598	-		Synpcc7942_0114	0.73	-0.0
113,617	+		Synpcc7942_0114	0.78	-0.1
113,620	-		Synpcc7942_0114	0.79	-0.1
113,649	+				-1.2
113,649	+				-0.7
113,657	-				+0.0
113,663	+				+1.3
113,663	+				-0.1
113,730	+		Synpcc7942_0115	0.19	-0.6
113,733	+		Synpcc7942_0115	0.20	+0.8
113,733	+		Synpcc7942_0115	0.20	+0.6
113,733	+		Synpcc7942_0115	0.20	+0.9
113,741	-		Synpcc7942_0115	0.21	-0.6
113,760	+		Synpcc7942_0115	0.25	-1.2
113,760	+		Synpcc7942_0115	0.25	+1.4
113,768	-		Synpcc7942_0115	0.27	-0.5
113,774	-		Synpcc7942_0115	0.28	-0.6
113,774	-		Synpcc7942_0115	0.28	-0.6
113,774	-		Synpcc7942_0115	0.28	+1.6
113,807	+		Synpcc7942_0115	0.34	-1.1
113,861	+		Synpcc7942_0115	0.45	+1.7
113,921	+		Synpcc7942_0115	0.56	+0.7
113,921	+		Synpcc7942_0115	0.56	-0.4
113,921	+		Synpcc7942_0115	0.56	+0.9
113,965	+		Synpcc7942_0115	0.65	-0.3
113,981	-		Synpcc7942_0115	0.68	-0.6
113,988	-		Synpcc7942_0115	0.69	-1.2
113,995	+		Synpcc7942_0115	0.71	+1.3
113,995	+		Synpcc7942_0115	0.71	-0.3
113,995	+		Synpcc7942_0115	0.71	+1.9
114,003	-		Synpcc7942_0115	0.72	-1.5
114,003	-		Synpcc7942_0115	0.72	-0.8
114,003	-		Synpcc7942_0115	0.72	+0.1
114,018	+		Synpcc7942_0115	0.75	+1.4
114,029	+		Synpcc7942_0115	0.77	+0.8
114,037	-		Synpcc7942_0115	0.79	+0.4
114,037	-		Synpcc7942_0115	0.79	+4.9
114,066	+		Synpcc7942_0115	0.84	+0.5
114,086	+		Synpcc7942_0115	0.88	+0.7
114,091	+		Synpcc7942_0115	0.89	-1.4
114,136	+				-0.7
114,141	+				+0.7
114,141	+				-1.0
114,156	+				-0.2
114,175	+				-1.4
114,176	+				-0.0
114,183	-				-0.3
114,261	+				+1.2
114,300	+				-2.0
114,348	-				+0.6
114,391	+				-0.8
114,393	-				+1.2
114,399	-	cscK	Synpcc7942_0116	0.10	-1.6
114,450	-	cscK	Synpcc7942_0116	0.15	+0.4
114,477	-	cscK	Synpcc7942_0116	0.18	-2.1
114,491	-	cscK	Synpcc7942_0116	0.20	-1.4
114,491	-	cscK	Synpcc7942_0116	0.20	+0.3
114,491	-	cscK	Synpcc7942_0116	0.20	+1.6
114,518	+	cscK	Synpcc7942_0116	0.22	+1.2
114,518	+	cscK	Synpcc7942_0116	0.22	+0.2
114,538	-	cscK	Synpcc7942_0116	0.25	-1.8
114,548	+	cscK	Synpcc7942_0116	0.26	+1.1
114,548	+	cscK	Synpcc7942_0116	0.26	+0.1
114,556	-	cscK	Synpcc7942_0116	0.26	+0.9
114,580	+	cscK	Synpcc7942_0116	0.29	+1.4
114,588	-	cscK	Synpcc7942_0116	0.30	+1.3
114,605	+	cscK	Synpcc7942_0116	0.31	-2.1
114,624	+	cscK	Synpcc7942_0116	0.33	-1.2