Experiment: MoYLS4 media with NH4 no edta
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1572 and DvMF_1573 are separated by 169 nucleotides DvMF_1573 and DvMF_1574 are separated by 48 nucleotides
DvMF_1572: DvMF_1572 - flavin reductase domain protein FMN-binding (RefSeq), at 1,938,349 to 1,938,921
_1572
DvMF_1573: DvMF_1573 - Undecaprenyl-phosphate galactose phosphotransferase, WbaP (RefSeq), at 1,939,091 to 1,940,503
_1573
DvMF_1574: DvMF_1574 - glycosyl transferase family 9 (RefSeq), at 1,940,552 to 1,941,691
_1574
Position (kb)
1939
1940
1941 Strain fitness (log2 ratio)
-1
0
1 at 1938.250 kb on - strand at 1938.263 kb on - strand at 1938.530 kb on - strand, within DvMF_1572 at 1938.646 kb on - strand, within DvMF_1572 at 1938.917 kb on + strand at 1939.047 kb on + strand at 1939.143 kb on - strand at 1939.278 kb on - strand, within DvMF_1573 at 1939.709 kb on + strand, within DvMF_1573 at 1939.717 kb on - strand, within DvMF_1573 at 1939.774 kb on + strand, within DvMF_1573 at 1939.922 kb on - strand, within DvMF_1573 at 1939.971 kb on - strand, within DvMF_1573 at 1940.013 kb on + strand, within DvMF_1573 at 1940.021 kb on - strand, within DvMF_1573 at 1940.096 kb on - strand, within DvMF_1573 at 1940.466 kb on - strand at 1940.466 kb on - strand at 1940.525 kb on + strand at 1940.525 kb on + strand at 1940.528 kb on - strand at 1940.618 kb on + strand at 1940.637 kb on + strand at 1940.716 kb on - strand, within DvMF_1574 at 1941.107 kb on + strand, within DvMF_1574 at 1941.199 kb on + strand, within DvMF_1574 at 1941.338 kb on - strand, within DvMF_1574
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media with NH4 no edta remove 1,938,250 - -0.0 1,938,263 - -1.0 1,938,530 - DvMF_1572 0.32 -1.4 1,938,646 - DvMF_1572 0.52 -0.4 1,938,917 + -0.5 1,939,047 + +0.1 1,939,143 - +1.4 1,939,278 - DvMF_1573 0.13 +1.5 1,939,709 + DvMF_1573 0.44 +0.3 1,939,717 - DvMF_1573 0.44 +0.6 1,939,774 + DvMF_1573 0.48 +1.0 1,939,922 - DvMF_1573 0.59 +0.9 1,939,971 - DvMF_1573 0.62 +1.6 1,940,013 + DvMF_1573 0.65 +1.3 1,940,021 - DvMF_1573 0.66 +0.4 1,940,096 - DvMF_1573 0.71 +1.4 1,940,466 - +1.1 1,940,466 - +1.2 1,940,525 + -0.3 1,940,525 + +0.1 1,940,528 - -0.9 1,940,618 + +1.4 1,940,637 + +0.1 1,940,716 - DvMF_1574 0.14 -0.5 1,941,107 + DvMF_1574 0.49 +0.2 1,941,199 + DvMF_1574 0.57 +0.3 1,941,338 - DvMF_1574 0.69 -0.0
Or see this region's nucleotide sequence