Experiment: Pyruvate-Sulfate (60-15mM) with Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0908 and DVU0909 are separated by 165 nucleotides DVU0909 and fliM are separated by 135 nucleotides fliM and truA are separated by 599 nucleotides
DVU0908: DVU0908 - ATP-dependent reduction of co(II)balamin (from data) , at 1,001,899 to 1,003,530
DVU0908
DVU0909: DVU0909 - hypothetical protein (TIGR), at 1,003,696 to 1,004,091
DVU0909
DVU0910: fliM - flagellar motor switch protein FliM (TIGR), at 1,004,227 to 1,005,207
fliM
DVU0911: truA - tRNA pseudouridine synthase A (TIGR), at 1,005,807 to 1,006,700
truA
Position (kb)
1004
1005
1006 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1003.258 kb on + strand, within DVU0908 at 1003.324 kb on + strand, within DVU0908 at 1003.350 kb on + strand, within DVU0908 at 1003.350 kb on + strand, within DVU0908 at 1003.429 kb on + strand at 1003.552 kb on + strand at 1003.640 kb on - strand at 1003.786 kb on + strand, within DVU0909 at 1003.786 kb on + strand, within DVU0909 at 1003.791 kb on + strand, within DVU0909 at 1003.794 kb on - strand, within DVU0909 at 1003.940 kb on - strand, within DVU0909 at 1004.050 kb on - strand, within DVU0909 at 1004.109 kb on + strand at 1004.117 kb on + strand at 1004.177 kb on - strand at 1004.335 kb on + strand, within fliM at 1004.452 kb on + strand, within fliM at 1004.645 kb on - strand, within fliM at 1004.679 kb on - strand, within fliM at 1004.679 kb on - strand, within fliM at 1004.688 kb on - strand, within fliM at 1004.690 kb on + strand, within fliM at 1004.768 kb on - strand, within fliM at 1004.903 kb on + strand, within fliM at 1004.945 kb on - strand, within fliM at 1004.979 kb on + strand, within fliM at 1005.058 kb on - strand, within fliM at 1005.065 kb on - strand, within fliM at 1005.083 kb on - strand, within fliM at 1005.121 kb on - strand at 1005.229 kb on - strand at 1005.379 kb on + strand at 1005.482 kb on + strand at 1005.533 kb on - strand at 1005.577 kb on - strand at 1005.680 kb on + strand at 1005.723 kb on - strand at 1005.807 kb on - strand at 1005.963 kb on - strand, within truA at 1006.088 kb on - strand, within truA at 1006.112 kb on - strand, within truA at 1006.112 kb on - strand, within truA at 1006.130 kb on - strand, within truA
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Tungstate 2mM remove 1,003,258 + DVU0908 0.83 -3.6 1,003,324 + DVU0908 0.87 -4.4 1,003,350 + DVU0908 0.89 -4.3 1,003,350 + DVU0908 0.89 +0.5 1,003,429 + -2.3 1,003,552 + -1.3 1,003,640 - -0.3 1,003,786 + DVU0909 0.23 +1.0 1,003,786 + DVU0909 0.23 +1.0 1,003,791 + DVU0909 0.24 +2.5 1,003,794 - DVU0909 0.25 +0.7 1,003,940 - DVU0909 0.62 +0.3 1,004,050 - DVU0909 0.89 +0.6 1,004,109 + -1.8 1,004,117 + +0.8 1,004,177 - -0.8 1,004,335 + fliM DVU0910 0.11 -1.3 1,004,452 + fliM DVU0910 0.23 -1.0 1,004,645 - fliM DVU0910 0.43 -0.4 1,004,679 - fliM DVU0910 0.46 -1.1 1,004,679 - fliM DVU0910 0.46 -1.4 1,004,688 - fliM DVU0910 0.47 -1.3 1,004,690 + fliM DVU0910 0.47 -1.0 1,004,768 - fliM DVU0910 0.55 -1.0 1,004,903 + fliM DVU0910 0.69 -0.3 1,004,945 - fliM DVU0910 0.73 -0.9 1,004,979 + fliM DVU0910 0.77 -3.0 1,005,058 - fliM DVU0910 0.85 -0.6 1,005,065 - fliM DVU0910 0.85 -0.3 1,005,083 - fliM DVU0910 0.87 -1.7 1,005,121 - -0.0 1,005,229 - -1.0 1,005,379 + +0.5 1,005,482 + -0.0 1,005,533 - -0.5 1,005,577 - -0.2 1,005,680 + -0.1 1,005,723 - -0.4 1,005,807 - -1.2 1,005,963 - truA DVU0911 0.17 -1.7 1,006,088 - truA DVU0911 0.31 +0.1 1,006,112 - truA DVU0911 0.34 -0.3 1,006,112 - truA DVU0911 0.34 -0.6 1,006,130 - truA DVU0911 0.36 -0.3
Or see this region's nucleotide sequence