Experiment: Pyruvate-Sulfate (60-15mM) with Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt hrcA and bcp are separated by 132 nucleotides bcp and DVU0815 are separated by 184 nucleotides
DVU0813: hrcA - heat-inducible transcription repressor HrcA (TIGR), at 900,335 to 901,402
hrcA
DVU0814: bcp - bacterioferritin comigratory protein, putative (TIGR), at 901,535 to 902,020
bcp
DVU0815: DVU0815 - AsmA family protein (TIGR), at 902,205 to 904,310
DVU0815
Position (kb) 901
902
903 Strain fitness (log2 ratio) -1
0
1
2
3 at 900.548 kb on + strand, within hrcA at 900.570 kb on + strand, within hrcA at 900.582 kb on + strand, within hrcA at 900.608 kb on + strand, within hrcA at 900.616 kb on + strand, within hrcA at 900.735 kb on + strand, within hrcA at 900.773 kb on + strand, within hrcA at 900.773 kb on + strand, within hrcA at 900.776 kb on - strand, within hrcA at 900.776 kb on - strand, within hrcA at 900.830 kb on + strand, within hrcA at 900.893 kb on - strand, within hrcA at 900.906 kb on + strand, within hrcA at 900.925 kb on - strand, within hrcA at 900.982 kb on + strand, within hrcA at 900.990 kb on - strand, within hrcA at 900.992 kb on + strand, within hrcA at 900.995 kb on - strand, within hrcA at 901.042 kb on - strand, within hrcA at 901.044 kb on - strand, within hrcA at 901.059 kb on + strand, within hrcA at 901.073 kb on + strand, within hrcA at 901.073 kb on + strand, within hrcA at 901.073 kb on + strand, within hrcA at 901.073 kb on + strand, within hrcA at 901.073 kb on + strand, within hrcA at 901.073 kb on + strand, within hrcA at 901.081 kb on - strand, within hrcA at 901.081 kb on - strand, within hrcA at 901.127 kb on - strand, within hrcA at 901.188 kb on - strand, within hrcA at 901.189 kb on + strand, within hrcA at 901.218 kb on - strand, within hrcA at 901.235 kb on - strand, within hrcA at 901.288 kb on + strand, within hrcA at 901.312 kb on - strand at 901.333 kb on + strand at 901.357 kb on - strand at 901.372 kb on + strand at 901.377 kb on - strand at 901.380 kb on - strand at 901.389 kb on - strand at 901.437 kb on + strand at 901.468 kb on - strand at 901.559 kb on + strand at 901.560 kb on + strand at 901.580 kb on - strand at 901.613 kb on + strand, within bcp at 901.623 kb on - strand, within bcp at 901.698 kb on + strand, within bcp at 901.709 kb on - strand, within bcp at 901.751 kb on + strand, within bcp at 901.781 kb on + strand, within bcp at 901.783 kb on - strand, within bcp at 901.801 kb on - strand, within bcp at 901.807 kb on + strand, within bcp at 901.820 kb on + strand, within bcp at 901.828 kb on - strand, within bcp at 901.897 kb on + strand, within bcp at 901.897 kb on + strand, within bcp at 901.928 kb on - strand, within bcp at 901.941 kb on - strand, within bcp at 901.999 kb on + strand at 902.045 kb on + strand at 902.053 kb on - strand at 902.171 kb on - strand at 902.233 kb on + strand at 902.241 kb on - strand at 902.241 kb on - strand at 902.241 kb on - strand at 902.386 kb on + strand at 902.393 kb on - strand at 902.429 kb on - strand, within DVU0815 at 902.477 kb on + strand, within DVU0815 at 902.562 kb on - strand, within DVU0815 at 902.608 kb on - strand, within DVU0815 at 902.680 kb on + strand, within DVU0815 at 902.685 kb on + strand, within DVU0815 at 902.791 kb on - strand, within DVU0815 at 902.829 kb on - strand, within DVU0815 at 902.836 kb on + strand, within DVU0815 at 902.989 kb on - strand, within DVU0815 at 903.003 kb on - strand, within DVU0815
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Tungstate 2mM remove 900,548 + hrcA DVU0813 0.20 +0.5 900,570 + hrcA DVU0813 0.22 +0.6 900,582 + hrcA DVU0813 0.23 +0.1 900,608 + hrcA DVU0813 0.26 +0.2 900,616 + hrcA DVU0813 0.26 +0.1 900,735 + hrcA DVU0813 0.37 +1.1 900,773 + hrcA DVU0813 0.41 +1.2 900,773 + hrcA DVU0813 0.41 -0.9 900,776 - hrcA DVU0813 0.41 -0.4 900,776 - hrcA DVU0813 0.41 -0.7 900,830 + hrcA DVU0813 0.46 -1.4 900,893 - hrcA DVU0813 0.52 -0.2 900,906 + hrcA DVU0813 0.53 -1.6 900,925 - hrcA DVU0813 0.55 -0.3 900,982 + hrcA DVU0813 0.61 +1.5 900,990 - hrcA DVU0813 0.61 -0.2 900,992 + hrcA DVU0813 0.62 -0.2 900,995 - hrcA DVU0813 0.62 -0.2 901,042 - hrcA DVU0813 0.66 -0.3 901,044 - hrcA DVU0813 0.66 -0.3 901,059 + hrcA DVU0813 0.68 -0.6 901,073 + hrcA DVU0813 0.69 -0.7 901,073 + hrcA DVU0813 0.69 +0.0 901,073 + hrcA DVU0813 0.69 -0.0 901,073 + hrcA DVU0813 0.69 +0.4 901,073 + hrcA DVU0813 0.69 +0.1 901,073 + hrcA DVU0813 0.69 +0.1 901,081 - hrcA DVU0813 0.70 -0.8 901,081 - hrcA DVU0813 0.70 +0.6 901,127 - hrcA DVU0813 0.74 -1.2 901,188 - hrcA DVU0813 0.80 +0.2 901,189 + hrcA DVU0813 0.80 +0.2 901,218 - hrcA DVU0813 0.83 -0.5 901,235 - hrcA DVU0813 0.84 -0.6 901,288 + hrcA DVU0813 0.89 +0.1 901,312 - +0.3 901,333 + +0.1 901,357 - +0.4 901,372 + +0.5 901,377 - +0.2 901,380 - -0.1 901,389 - +0.5 901,437 + -0.2 901,468 - -0.4 901,559 + +0.9 901,560 + +0.2 901,580 - -0.9 901,613 + bcp DVU0814 0.16 +0.1 901,623 - bcp DVU0814 0.18 -0.3 901,698 + bcp DVU0814 0.34 +0.2 901,709 - bcp DVU0814 0.36 -1.7 901,751 + bcp DVU0814 0.44 -0.6 901,781 + bcp DVU0814 0.51 +0.8 901,783 - bcp DVU0814 0.51 -0.2 901,801 - bcp DVU0814 0.55 +0.1 901,807 + bcp DVU0814 0.56 +0.7 901,820 + bcp DVU0814 0.59 +0.9 901,828 - bcp DVU0814 0.60 +0.2 901,897 + bcp DVU0814 0.74 +0.1 901,897 + bcp DVU0814 0.74 +0.1 901,928 - bcp DVU0814 0.81 +0.5 901,941 - bcp DVU0814 0.84 -0.2 901,999 + +2.9 902,045 + +0.2 902,053 - -0.3 902,171 - -0.4 902,233 + +0.5 902,241 - +1.7 902,241 - -1.1 902,241 - -0.5 902,386 + +0.8 902,393 - +1.3 902,429 - DVU0815 0.11 +0.9 902,477 + DVU0815 0.13 +0.1 902,562 - DVU0815 0.17 -0.7 902,608 - DVU0815 0.19 +1.1 902,680 + DVU0815 0.23 -0.4 902,685 + DVU0815 0.23 -0.8 902,791 - DVU0815 0.28 +2.5 902,829 - DVU0815 0.30 +0.9 902,836 + DVU0815 0.30 -0.7 902,989 - DVU0815 0.37 -0.6 903,003 - DVU0815 0.38 +1.9
Or see this region's nucleotide sequence