Experiment: KB with Prenyletin 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4771 and Psyr_4772 are separated by 259 nucleotides Psyr_4772 and Psyr_4773 are separated by 379 nucleotides Psyr_4773 and Psyr_4774 are separated by 119 nucleotides
Psyr_4771: Psyr_4771 - Peptide methionine sulfoxide reductase, at 5,649,673 to 5,650,320
_4771
Psyr_4772: Psyr_4772 - Protein of unknown function DUF519, at 5,650,580 to 5,651,416
_4772
Psyr_4773: Psyr_4773 - Hypothetical protein, at 5,651,796 to 5,652,026
_4773
Psyr_4774: Psyr_4774 - Hypothetical protein, at 5,652,146 to 5,652,412
_4774
Position (kb) 5650
5651
5652 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 5649.594 kb on + strand at 5649.594 kb on + strand at 5649.594 kb on + strand at 5649.595 kb on - strand at 5649.595 kb on - strand at 5649.595 kb on - strand at 5649.610 kb on + strand at 5649.610 kb on + strand at 5649.610 kb on + strand at 5649.610 kb on + strand at 5649.610 kb on + strand at 5649.610 kb on + strand at 5649.610 kb on + strand at 5649.610 kb on + strand at 5649.610 kb on + strand at 5649.610 kb on + strand at 5649.610 kb on + strand at 5649.610 kb on + strand at 5649.611 kb on - strand at 5649.611 kb on - strand at 5649.611 kb on - strand at 5649.611 kb on - strand at 5649.611 kb on - strand at 5649.611 kb on - strand at 5649.611 kb on - strand at 5649.611 kb on - strand at 5649.611 kb on - strand at 5649.611 kb on - strand at 5649.614 kb on + strand at 5649.614 kb on + strand at 5649.614 kb on + strand at 5649.614 kb on + strand at 5649.614 kb on + strand at 5649.614 kb on + strand at 5649.614 kb on + strand at 5649.614 kb on + strand at 5649.614 kb on + strand at 5649.614 kb on + strand at 5649.614 kb on + strand at 5649.615 kb on - strand at 5649.615 kb on - strand at 5649.615 kb on - strand at 5649.615 kb on - strand at 5649.615 kb on - strand at 5649.615 kb on - strand at 5649.615 kb on - strand at 5649.615 kb on - strand at 5649.615 kb on - strand at 5649.615 kb on - strand at 5649.615 kb on - strand at 5649.615 kb on - strand at 5649.615 kb on - strand at 5649.615 kb on - strand at 5649.615 kb on - strand at 5649.615 kb on - strand at 5649.615 kb on - strand at 5649.666 kb on - strand at 5649.695 kb on + strand at 5649.710 kb on + strand at 5649.710 kb on + strand at 5649.711 kb on - strand at 5649.711 kb on - strand at 5649.753 kb on + strand, within Psyr_4771 at 5649.753 kb on + strand, within Psyr_4771 at 5649.753 kb on + strand, within Psyr_4771 at 5649.753 kb on + strand, within Psyr_4771 at 5649.753 kb on + strand, within Psyr_4771 at 5649.753 kb on + strand, within Psyr_4771 at 5649.937 kb on + strand, within Psyr_4771 at 5649.937 kb on + strand, within Psyr_4771 at 5649.938 kb on - strand, within Psyr_4771 at 5649.992 kb on - strand, within Psyr_4771 at 5649.992 kb on - strand, within Psyr_4771 at 5650.108 kb on + strand, within Psyr_4771 at 5650.108 kb on + strand, within Psyr_4771 at 5650.109 kb on - strand, within Psyr_4771 at 5650.109 kb on - strand, within Psyr_4771 at 5650.243 kb on + strand, within Psyr_4771 at 5650.243 kb on + strand, within Psyr_4771 at 5650.255 kb on + strand, within Psyr_4771 at 5650.255 kb on + strand, within Psyr_4771 at 5650.255 kb on + strand, within Psyr_4771 at 5650.255 kb on + strand, within Psyr_4771 at 5650.256 kb on - strand at 5650.398 kb on + strand at 5650.398 kb on + strand at 5650.401 kb on + strand at 5650.401 kb on + strand at 5650.491 kb on + strand at 5650.492 kb on - strand at 5650.492 kb on - strand at 5650.492 kb on - strand at 5650.492 kb on - strand at 5650.492 kb on - strand at 5650.492 kb on - strand at 5650.492 kb on - strand at 5650.495 kb on + strand at 5650.495 kb on + strand at 5650.495 kb on + strand at 5650.495 kb on + strand at 5650.495 kb on + strand at 5650.495 kb on + strand at 5650.495 kb on + strand at 5650.495 kb on + strand at 5650.495 kb on + strand at 5650.495 kb on + strand at 5650.495 kb on + strand at 5650.495 kb on + strand at 5650.495 kb on + strand at 5650.495 kb on + strand at 5650.495 kb on + strand at 5650.496 kb on - strand at 5650.496 kb on - strand at 5650.496 kb on - strand at 5650.496 kb on - strand at 5650.496 kb on - strand at 5650.496 kb on - strand at 5650.496 kb on - strand at 5650.496 kb on - strand at 5650.496 kb on - strand at 5650.496 kb on - strand at 5650.496 kb on - strand at 5650.496 kb on - strand at 5650.497 kb on + strand at 5650.797 kb on + strand, within Psyr_4772 at 5650.798 kb on - strand, within Psyr_4772 at 5650.798 kb on - strand, within Psyr_4772 at 5650.819 kb on + strand, within Psyr_4772 at 5651.178 kb on + strand, within Psyr_4772 at 5651.178 kb on + strand, within Psyr_4772 at 5651.179 kb on - strand, within Psyr_4772 at 5651.277 kb on + strand, within Psyr_4772 at 5651.277 kb on + strand, within Psyr_4772 at 5651.278 kb on - strand, within Psyr_4772 at 5651.397 kb on + strand at 5651.398 kb on - strand at 5651.398 kb on - strand at 5651.398 kb on - strand at 5651.409 kb on + strand at 5651.558 kb on + strand at 5651.559 kb on - strand at 5651.559 kb on - strand at 5651.559 kb on - strand at 5651.559 kb on - strand at 5651.559 kb on - strand at 5651.559 kb on - strand at 5651.579 kb on + strand at 5651.579 kb on + strand at 5651.596 kb on + strand at 5651.596 kb on + strand at 5651.597 kb on - strand at 5651.597 kb on - strand at 5651.597 kb on - strand at 5651.666 kb on + strand at 5651.666 kb on + strand at 5651.709 kb on - strand at 5651.720 kb on + strand at 5651.720 kb on + strand at 5651.721 kb on - strand at 5651.723 kb on + strand at 5651.723 kb on + strand at 5651.724 kb on - strand at 5651.724 kb on - strand at 5651.751 kb on - strand at 5651.784 kb on + strand at 5651.784 kb on + strand at 5651.785 kb on - strand at 5651.801 kb on - strand at 5652.005 kb on - strand at 5652.005 kb on - strand at 5652.054 kb on + strand at 5652.054 kb on + strand at 5652.301 kb on - strand, within Psyr_4774 at 5652.301 kb on - strand, within Psyr_4774 at 5652.301 kb on - strand, within Psyr_4774 at 5652.386 kb on + strand at 5652.386 kb on + strand at 5652.386 kb on + strand at 5652.387 kb on - strand at 5652.387 kb on - strand at 5652.387 kb on - strand at 5652.411 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Prenyletin 10 mM remove 5,649,594 + +0.1 5,649,594 + +1.5 5,649,594 + -0.6 5,649,595 - +1.2 5,649,595 - +1.0 5,649,595 - +1.2 5,649,610 + +1.2 5,649,610 + +1.0 5,649,610 + -0.4 5,649,610 + +0.5 5,649,610 + -2.5 5,649,610 + -0.4 5,649,610 + +1.0 5,649,610 + +0.2 5,649,610 + +1.0 5,649,610 + -1.1 5,649,610 + -0.1 5,649,610 + -0.9 5,649,611 - +1.0 5,649,611 - -0.8 5,649,611 - -0.7 5,649,611 - -0.1 5,649,611 - -2.0 5,649,611 - +0.1 5,649,611 - -0.7 5,649,611 - +2.7 5,649,611 - -0.5 5,649,611 - -0.6 5,649,614 + -1.0 5,649,614 + +0.2 5,649,614 + -0.1 5,649,614 + -1.7 5,649,614 + +0.0 5,649,614 + +0.0 5,649,614 + -0.1 5,649,614 + -0.0 5,649,614 + -1.3 5,649,614 + -0.6 5,649,614 + -1.1 5,649,615 - +1.8 5,649,615 - +0.9 5,649,615 - -1.2 5,649,615 - +0.4 5,649,615 - +0.2 5,649,615 - +0.2 5,649,615 - -0.2 5,649,615 - +0.5 5,649,615 - +2.7 5,649,615 - -0.2 5,649,615 - -1.8 5,649,615 - -0.3 5,649,615 - -0.8 5,649,615 - +1.1 5,649,615 - -0.2 5,649,615 - +0.9 5,649,615 - +0.4 5,649,666 - +0.5 5,649,695 + +2.2 5,649,710 + +0.2 5,649,710 + -1.0 5,649,711 - -0.4 5,649,711 - -0.3 5,649,753 + Psyr_4771 0.12 +0.8 5,649,753 + Psyr_4771 0.12 -1.1 5,649,753 + Psyr_4771 0.12 -0.7 5,649,753 + Psyr_4771 0.12 -0.0 5,649,753 + Psyr_4771 0.12 -0.2 5,649,753 + Psyr_4771 0.12 -0.1 5,649,937 + Psyr_4771 0.41 +0.7 5,649,937 + Psyr_4771 0.41 +0.6 5,649,938 - Psyr_4771 0.41 -0.0 5,649,992 - Psyr_4771 0.49 +0.4 5,649,992 - Psyr_4771 0.49 -2.4 5,650,108 + Psyr_4771 0.67 -0.4 5,650,108 + Psyr_4771 0.67 +0.9 5,650,109 - Psyr_4771 0.67 -1.4 5,650,109 - Psyr_4771 0.67 -0.2 5,650,243 + Psyr_4771 0.88 -0.1 5,650,243 + Psyr_4771 0.88 +0.3 5,650,255 + Psyr_4771 0.90 +0.2 5,650,255 + Psyr_4771 0.90 +0.3 5,650,255 + Psyr_4771 0.90 -0.1 5,650,255 + Psyr_4771 0.90 +0.0 5,650,256 - +3.0 5,650,398 + -0.2 5,650,398 + +1.0 5,650,401 + -0.5 5,650,401 + -1.0 5,650,491 + -0.5 5,650,492 - +1.6 5,650,492 - -0.2 5,650,492 - +1.7 5,650,492 - +0.4 5,650,492 - -1.1 5,650,492 - +0.3 5,650,492 - +0.3 5,650,495 + +0.1 5,650,495 + +1.0 5,650,495 + -0.7 5,650,495 + -1.0 5,650,495 + +1.2 5,650,495 + -1.5 5,650,495 + -0.1 5,650,495 + +0.1 5,650,495 + +1.5 5,650,495 + -0.2 5,650,495 + -0.5 5,650,495 + +0.4 5,650,495 + +1.2 5,650,495 + +0.0 5,650,495 + -1.2 5,650,496 - +0.8 5,650,496 - +0.8 5,650,496 - -0.7 5,650,496 - -1.5 5,650,496 - +0.1 5,650,496 - -0.5 5,650,496 - +0.3 5,650,496 - +0.0 5,650,496 - -0.8 5,650,496 - +0.4 5,650,496 - -0.7 5,650,496 - -0.1 5,650,497 + +0.4 5,650,797 + Psyr_4772 0.26 +1.9 5,650,798 - Psyr_4772 0.26 +1.7 5,650,798 - Psyr_4772 0.26 +0.4 5,650,819 + Psyr_4772 0.29 +0.4 5,651,178 + Psyr_4772 0.71 +0.4 5,651,178 + Psyr_4772 0.71 +0.2 5,651,179 - Psyr_4772 0.72 -0.8 5,651,277 + Psyr_4772 0.83 -0.6 5,651,277 + Psyr_4772 0.83 +0.1 5,651,278 - Psyr_4772 0.83 -0.0 5,651,397 + -1.8 5,651,398 - -1.4 5,651,398 - +0.6 5,651,398 - +0.5 5,651,409 + -1.2 5,651,558 + +4.0 5,651,559 - +0.1 5,651,559 - +1.1 5,651,559 - +3.8 5,651,559 - -0.3 5,651,559 - -0.3 5,651,559 - +0.4 5,651,579 + -1.2 5,651,579 + -1.2 5,651,596 + -0.0 5,651,596 + +1.0 5,651,597 - +0.1 5,651,597 - -0.4 5,651,597 - -0.4 5,651,666 + -0.9 5,651,666 + +0.8 5,651,709 - +0.9 5,651,720 + +0.6 5,651,720 + +2.2 5,651,721 - -0.1 5,651,723 + -1.3 5,651,723 + -0.8 5,651,724 - +0.1 5,651,724 - -0.7 5,651,751 - -0.4 5,651,784 + +1.0 5,651,784 + -2.0 5,651,785 - +0.6 5,651,801 - -1.1 5,652,005 - +1.5 5,652,005 - +1.0 5,652,054 + -0.3 5,652,054 + -1.0 5,652,301 - Psyr_4774 0.58 -0.7 5,652,301 - Psyr_4774 0.58 -0.7 5,652,301 - Psyr_4774 0.58 -2.3 5,652,386 + -0.9 5,652,386 + +0.2 5,652,386 + -0.9 5,652,387 - -0.4 5,652,387 - +0.1 5,652,387 - -1.3 5,652,411 - +0.6
Or see this region's nucleotide sequence