Experiment: MoYLS4 media with N2 no edta
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2621 and DvMF_2622 are separated by 17 nucleotides DvMF_2622 and DvMF_2623 are separated by 256 nucleotides
DvMF_2621: DvMF_2621 - Nitrogenase (RefSeq), at 3,310,801 to 3,312,417
_2621
DvMF_2622: DvMF_2622 - nitrogenase cofactor biosynthesis protein NifB (RefSeq), at 3,312,435 to 3,313,718
_2622
DvMF_2623: DvMF_2623 - Rhodanese domain protein (RefSeq), at 3,313,975 to 3,314,430
_2623
Position (kb)
3312
3313
3314 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3311.467 kb on + strand, within DvMF_2621 at 3311.477 kb on + strand, within DvMF_2621 at 3311.485 kb on - strand, within DvMF_2621 at 3311.585 kb on + strand, within DvMF_2621 at 3311.585 kb on + strand, within DvMF_2621 at 3311.594 kb on + strand, within DvMF_2621 at 3311.627 kb on + strand, within DvMF_2621 at 3311.842 kb on - strand, within DvMF_2621 at 3311.864 kb on - strand, within DvMF_2621 at 3311.926 kb on - strand, within DvMF_2621 at 3312.283 kb on + strand at 3312.400 kb on + strand at 3312.591 kb on + strand, within DvMF_2622 at 3312.591 kb on + strand, within DvMF_2622 at 3312.892 kb on - strand, within DvMF_2622 at 3312.976 kb on + strand, within DvMF_2622 at 3312.976 kb on + strand, within DvMF_2622 at 3312.976 kb on + strand, within DvMF_2622 at 3312.976 kb on + strand, within DvMF_2622 at 3312.984 kb on - strand, within DvMF_2622 at 3313.004 kb on + strand, within DvMF_2622 at 3313.082 kb on - strand, within DvMF_2622 at 3313.415 kb on - strand, within DvMF_2622 at 3313.439 kb on - strand, within DvMF_2622 at 3313.486 kb on + strand, within DvMF_2622 at 3313.486 kb on + strand, within DvMF_2622 at 3313.494 kb on - strand, within DvMF_2622 at 3314.042 kb on - strand, within DvMF_2623 at 3314.335 kb on + strand, within DvMF_2623 at 3314.478 kb on - strand at 3314.547 kb on - strand at 3314.547 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media with N2 no edta remove 3,311,467 + DvMF_2621 0.41 -2.0 3,311,477 + DvMF_2621 0.42 -2.7 3,311,485 - DvMF_2621 0.42 -2.6 3,311,585 + DvMF_2621 0.48 -1.9 3,311,585 + DvMF_2621 0.48 -2.3 3,311,594 + DvMF_2621 0.49 -2.3 3,311,627 + DvMF_2621 0.51 -2.5 3,311,842 - DvMF_2621 0.64 -2.2 3,311,864 - DvMF_2621 0.66 -2.7 3,311,926 - DvMF_2621 0.70 -2.6 3,312,283 + -3.7 3,312,400 + -2.4 3,312,591 + DvMF_2622 0.12 -2.2 3,312,591 + DvMF_2622 0.12 -2.1 3,312,892 - DvMF_2622 0.36 -2.0 3,312,976 + DvMF_2622 0.42 -2.3 3,312,976 + DvMF_2622 0.42 -3.3 3,312,976 + DvMF_2622 0.42 -2.4 3,312,976 + DvMF_2622 0.42 -1.7 3,312,984 - DvMF_2622 0.43 -2.9 3,313,004 + DvMF_2622 0.44 -2.8 3,313,082 - DvMF_2622 0.50 -2.3 3,313,415 - DvMF_2622 0.76 -2.7 3,313,439 - DvMF_2622 0.78 -2.9 3,313,486 + DvMF_2622 0.82 -3.9 3,313,486 + DvMF_2622 0.82 -3.0 3,313,494 - DvMF_2622 0.82 -2.9 3,314,042 - DvMF_2623 0.15 -0.5 3,314,335 + DvMF_2623 0.79 -0.4 3,314,478 - -0.5 3,314,547 - -0.1 3,314,547 - -0.1
Or see this region's nucleotide sequence