Experiment: MoYLS4 media with N2 no edta
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2147 and DvMF_2148 are separated by 335 nucleotides DvMF_2148 and DvMF_2149 overlap by 4 nucleotides
DvMF_2147: DvMF_2147 - zinc resistance-associated protein (RefSeq), at 2,674,692 to 2,675,231
_2147
DvMF_2148: DvMF_2148 - multi-sensor signal transduction histidine kinase (RefSeq), at 2,675,567 to 2,677,756
_2148
DvMF_2149: DvMF_2149 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 2,677,753 to 2,679,186
_2149
Position (kb)
2675
2676
2677
2678 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2674.960 kb on + strand, within DvMF_2147 at 2675.010 kb on - strand, within DvMF_2147 at 2675.324 kb on - strand at 2675.428 kb on + strand at 2675.602 kb on + strand at 2675.765 kb on + strand at 2675.830 kb on + strand, within DvMF_2148 at 2676.059 kb on + strand, within DvMF_2148 at 2676.059 kb on + strand, within DvMF_2148 at 2676.059 kb on + strand, within DvMF_2148 at 2676.163 kb on + strand, within DvMF_2148 at 2676.451 kb on + strand, within DvMF_2148 at 2676.505 kb on - strand, within DvMF_2148 at 2676.512 kb on - strand, within DvMF_2148 at 2676.754 kb on - strand, within DvMF_2148 at 2676.840 kb on + strand, within DvMF_2148 at 2676.957 kb on - strand, within DvMF_2148 at 2677.334 kb on - strand, within DvMF_2148 at 2677.467 kb on + strand, within DvMF_2148 at 2677.594 kb on - strand at 2677.669 kb on + strand at 2677.712 kb on + strand at 2677.712 kb on + strand at 2677.804 kb on + strand at 2677.832 kb on - strand at 2678.023 kb on + strand, within DvMF_2149 at 2678.088 kb on - strand, within DvMF_2149 at 2678.101 kb on - strand, within DvMF_2149 at 2678.218 kb on + strand, within DvMF_2149 at 2678.554 kb on - strand, within DvMF_2149
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media with N2 no edta remove 2,674,960 + DvMF_2147 0.50 -1.9 2,675,010 - DvMF_2147 0.59 -1.8 2,675,324 - -2.7 2,675,428 + -1.3 2,675,602 + +3.2 2,675,765 + +1.5 2,675,830 + DvMF_2148 0.12 +1.5 2,676,059 + DvMF_2148 0.22 +1.1 2,676,059 + DvMF_2148 0.22 +0.8 2,676,059 + DvMF_2148 0.22 +1.3 2,676,163 + DvMF_2148 0.27 +2.2 2,676,451 + DvMF_2148 0.40 +2.0 2,676,505 - DvMF_2148 0.43 +1.4 2,676,512 - DvMF_2148 0.43 +1.6 2,676,754 - DvMF_2148 0.54 +0.6 2,676,840 + DvMF_2148 0.58 +1.2 2,676,957 - DvMF_2148 0.63 +1.5 2,677,334 - DvMF_2148 0.81 +0.8 2,677,467 + DvMF_2148 0.87 +1.3 2,677,594 - +4.2 2,677,669 + +1.5 2,677,712 + +1.0 2,677,712 + +3.8 2,677,804 + -0.4 2,677,832 - +0.5 2,678,023 + DvMF_2149 0.19 +0.9 2,678,088 - DvMF_2149 0.23 +1.2 2,678,101 - DvMF_2149 0.24 +0.7 2,678,218 + DvMF_2149 0.32 +0.5 2,678,554 - DvMF_2149 0.56 +0.4
Or see this region's nucleotide sequence