Experiment: MoYLS4 media with N2 no edta
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0045 and DvMF_0046 are separated by 292 nucleotides DvMF_0046 and DvMF_0047 are separated by 68 nucleotides
DvMF_0045: DvMF_0045 - Endonuclease/exonuclease/phosphatase (RefSeq), at 60,152 to 61,366
_0045
DvMF_0046: DvMF_0046 - ornithine carbamoyltransferase (RefSeq), at 61,659 to 62,561
_0046
DvMF_0047: DvMF_0047 - argininosuccinate synthase (RefSeq), at 62,630 to 63,835
_0047
Position (kb) 61
62
63 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 60.661 kb on - strand, within DvMF_0045 at 60.899 kb on + strand, within DvMF_0045 at 60.991 kb on - strand, within DvMF_0045 at 61.267 kb on + strand at 61.308 kb on + strand at 61.451 kb on - strand at 61.762 kb on - strand, within DvMF_0046 at 61.852 kb on - strand, within DvMF_0046 at 61.905 kb on - strand, within DvMF_0046 at 61.960 kb on + strand, within DvMF_0046 at 62.083 kb on + strand, within DvMF_0046 at 62.180 kb on + strand, within DvMF_0046 at 62.180 kb on + strand, within DvMF_0046 at 62.180 kb on + strand, within DvMF_0046 at 62.188 kb on - strand, within DvMF_0046 at 62.188 kb on - strand, within DvMF_0046 at 62.263 kb on + strand, within DvMF_0046 at 62.280 kb on + strand, within DvMF_0046 at 62.617 kb on + strand at 62.741 kb on - strand at 62.945 kb on + strand, within DvMF_0047 at 63.126 kb on + strand, within DvMF_0047 at 63.144 kb on + strand, within DvMF_0047 at 63.144 kb on + strand, within DvMF_0047 at 63.154 kb on + strand, within DvMF_0047 at 63.154 kb on + strand, within DvMF_0047 at 63.154 kb on + strand, within DvMF_0047 at 63.157 kb on - strand, within DvMF_0047 at 63.162 kb on - strand, within DvMF_0047 at 63.172 kb on - strand, within DvMF_0047 at 63.455 kb on + strand, within DvMF_0047 at 63.468 kb on - strand, within DvMF_0047
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media with N2 no edta remove 60,661 - DvMF_0045 0.42 -0.3 60,899 + DvMF_0045 0.61 -0.5 60,991 - DvMF_0045 0.69 -0.4 61,267 + -0.5 61,308 + -1.1 61,451 - -0.8 61,762 - DvMF_0046 0.11 -2.9 61,852 - DvMF_0046 0.21 -3.4 61,905 - DvMF_0046 0.27 -2.5 61,960 + DvMF_0046 0.33 -2.5 62,083 + DvMF_0046 0.47 -3.1 62,180 + DvMF_0046 0.58 -4.3 62,180 + DvMF_0046 0.58 -2.9 62,180 + DvMF_0046 0.58 -2.6 62,188 - DvMF_0046 0.59 -3.3 62,188 - DvMF_0046 0.59 -3.2 62,263 + DvMF_0046 0.67 -3.8 62,280 + DvMF_0046 0.69 -2.4 62,617 + -0.3 62,741 - -4.8 62,945 + DvMF_0047 0.26 -1.9 63,126 + DvMF_0047 0.41 -2.4 63,144 + DvMF_0047 0.43 -3.2 63,144 + DvMF_0047 0.43 -2.8 63,154 + DvMF_0047 0.43 -3.2 63,154 + DvMF_0047 0.43 -3.3 63,154 + DvMF_0047 0.43 -2.6 63,157 - DvMF_0047 0.44 -2.8 63,162 - DvMF_0047 0.44 -2.9 63,172 - DvMF_0047 0.45 -3.3 63,455 + DvMF_0047 0.68 -0.3 63,468 - DvMF_0047 0.69 -2.5
Or see this region's nucleotide sequence