Experiment: MoYLS4 media with N2 no edta
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2109 and DvMF_2110 are separated by 328 nucleotides DvMF_2110 and DvMF_2111 are separated by 392 nucleotides
DvMF_2109: DvMF_2109 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 2,628,239 to 2,629,786
_2109
DvMF_2110: DvMF_2110 - oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq), at 2,630,115 to 2,631,065
_2110
DvMF_2111: DvMF_2111 - hypothetical protein (RefSeq), at 2,631,458 to 2,631,952
_2111
Position (kb)
2630
2631
2632 Strain fitness (log2 ratio)
-1
0
1
2 at 2629.174 kb on - strand, within DvMF_2109 at 2629.240 kb on + strand, within DvMF_2109 at 2629.353 kb on + strand, within DvMF_2109 at 2629.434 kb on + strand, within DvMF_2109 at 2629.435 kb on - strand, within DvMF_2109 at 2629.781 kb on + strand at 2629.783 kb on + strand at 2629.985 kb on - strand at 2630.056 kb on + strand at 2630.193 kb on - strand at 2630.431 kb on - strand, within DvMF_2110 at 2630.714 kb on - strand, within DvMF_2110 at 2630.886 kb on - strand, within DvMF_2110 at 2631.034 kb on - strand at 2631.460 kb on - strand at 2631.610 kb on - strand, within DvMF_2111 at 2631.729 kb on + strand, within DvMF_2111 at 2631.812 kb on - strand, within DvMF_2111 at 2631.888 kb on - strand, within DvMF_2111 at 2631.888 kb on - strand, within DvMF_2111 at 2631.900 kb on + strand, within DvMF_2111 at 2631.956 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media with N2 no edta remove 2,629,174 - DvMF_2109 0.60 -0.3 2,629,240 + DvMF_2109 0.65 -0.3 2,629,353 + DvMF_2109 0.72 -0.2 2,629,434 + DvMF_2109 0.77 -0.4 2,629,435 - DvMF_2109 0.77 -0.6 2,629,781 + +0.1 2,629,783 + -0.5 2,629,985 - -0.4 2,630,056 + +0.4 2,630,193 - +0.0 2,630,431 - DvMF_2110 0.33 -0.1 2,630,714 - DvMF_2110 0.63 +2.3 2,630,886 - DvMF_2110 0.81 +0.0 2,631,034 - +0.3 2,631,460 - -0.2 2,631,610 - DvMF_2111 0.31 +0.4 2,631,729 + DvMF_2111 0.55 -0.5 2,631,812 - DvMF_2111 0.72 +1.8 2,631,888 - DvMF_2111 0.87 -0.6 2,631,888 - DvMF_2111 0.87 -0.6 2,631,900 + DvMF_2111 0.89 -0.4 2,631,956 - -0.4
Or see this region's nucleotide sequence