Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4271

Experiment: BHIS with Dimethyl Sulfoxide 0.1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 0.1 vol%
5,626,853	+		BT4270	0.53	-0.8
5,626,929	-		BT4270	0.57	-1.8
5,627,054	+		BT4270	0.64	-2.8
5,627,065	+		BT4270	0.64	+0.1
5,627,066	-		BT4270	0.64	-2.3
5,627,066	-		BT4270	0.64	-3.1
5,627,070	-		BT4270	0.65	-0.5
5,627,111	+		BT4270	0.67	-2.1
5,627,124	+		BT4270	0.68	-1.9
5,627,202	-		BT4270	0.72	-0.9
5,627,220	-		BT4270	0.73	+0.4
5,627,284	+		BT4270	0.76	-0.7
5,627,284	+		BT4270	0.76	-1.4
5,627,285	-		BT4270	0.77	-1.6
5,627,391	+		BT4270	0.82	-2.1
5,627,493	+		BT4270	0.88	-1.6
5,627,494	-		BT4270	0.88	-2.1
5,627,495	+		BT4270	0.88	-1.7
5,627,560	-				-1.0
5,627,565	+				-1.5
5,627,639	+				-0.6
5,627,653	-				-0.4
5,627,659	-				-1.1
5,627,660	+				+1.0
5,627,702	-				+0.0
5,627,721	-				-1.2
5,627,801	-				+0.0
5,627,855	+				+0.0
5,627,989	+		BT4271	0.23	-1.0
5,627,989	+		BT4271	0.23	+0.0
5,628,015	+				+0.0
5,628,068	-		BT4271	0.34	-2.3
5,628,068	-		BT4271	0.34	-3.4
5,628,180	-		BT4271	0.50	+1.0
5,628,205	-		BT4271	0.54	-2.7
5,628,205	-		BT4271	0.54	-2.0
5,628,398	+		BT4271	0.81	-1.3
5,628,471	+				-0.5
5,628,565	+				+1.0
5,628,566	-				+0.8
5,628,569	+				-2.3
5,628,570	-				-1.8
5,628,570	-				+0.0
5,628,599	+				+0.0
5,628,606	+				-1.6
5,628,627	-				-1.4
5,628,627	-				-2.6
5,628,703	+				-0.8
5,628,854	+		BT4272	0.11	+0.0
5,628,994	-		BT4272	0.15	-2.4
5,629,000	+		BT4272	0.15	-2.6
5,629,000	+		BT4272	0.15	+0.0
5,629,052	+		BT4272	0.17	+0.8
5,629,053	-		BT4272	0.17	-0.8
5,629,127	+		BT4272	0.20	-0.6
5,629,127	+		BT4272	0.20	+0.0
5,629,128	-		BT4272	0.20	-0.1
5,629,142	-		BT4272	0.20	+0.0
5,629,164	+		BT4272	0.21	+0.0
5,629,216	+		BT4272	0.23	+0.0
5,629,286	+		BT4272	0.25	-1.4
5,629,288	+		BT4272	0.25	-1.4
5,629,300	-		BT4272	0.26	-1.4
5,629,374	+		BT4272	0.28	-0.2
5,629,402	+		BT4272	0.29	+0.0
5,629,407	+		BT4272	0.29	+0.4
5,629,407	+		BT4272	0.29	-3.0
5,629,408	-		BT4272	0.29	-1.4
5,629,414	+		BT4272	0.29	+0.0
5,629,433	+		BT4272	0.30	-1.0
5,629,491	-		BT4272	0.32	-2.5
5,629,498	+		BT4272	0.32	-0.4
5,629,507	-		BT4272	0.32	-0.5