Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4117

Experiment: BHIS with Dimethyl Sulfoxide 0.1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 0.1 vol%
5,390,618	-		BT4116	0.59	-1.9
5,390,634	-		BT4116	0.60	-1.5
5,390,664	-		BT4116	0.62	-0.6
5,390,769	-		BT4116	0.69	-0.5
5,390,814	+		BT4116	0.72	-2.6
5,390,815	-		BT4116	0.72	+1.5
5,390,871	+		BT4116	0.75	-2.7
5,391,011	+		BT4116	0.84	-2.6
5,391,011	+		BT4116	0.84	-2.1
5,391,011	+		BT4116	0.84	-0.6
5,391,012	-		BT4116	0.84	-3.4
5,391,012	-		BT4116	0.84	-1.3
5,391,013	+		BT4116	0.84	-1.6
5,391,016	-		BT4116	0.84	-0.7
5,391,016	-		BT4116	0.84	-0.4
5,391,038	+		BT4116	0.86	-0.0
5,391,162	+				-1.3
5,391,216	+				-0.0
5,391,216	+				+0.4
5,391,254	+				-0.0
5,391,289	-				-1.2
5,391,304	+				-1.9
5,391,305	-				-3.0
5,391,309	-				-0.3
5,391,327	-				-2.3
5,391,385	-				-0.0
5,391,395	-				+0.5
5,391,407	-				-0.0
5,391,509	+				-1.6
5,391,537	-				-0.0
5,391,574	-				+0.4
5,391,676	-		BT4117	0.17	-2.6
5,391,677	+		BT4117	0.17	-1.0
5,391,681	-		BT4117	0.17	-1.3
5,391,683	+		BT4117	0.17	-2.0
5,391,684	-		BT4117	0.18	-2.9
5,391,684	-		BT4117	0.18	-1.7
5,391,705	+		BT4117	0.20	-1.3
5,391,707	+		BT4117	0.21	-1.1
5,391,707	+		BT4117	0.21	-1.8
5,391,728	+		BT4117	0.23	-2.0
5,391,753	+		BT4117	0.26	-1.0
5,391,761	+		BT4117	0.27	-2.0
5,391,910	-		BT4117	0.46	-1.0
5,391,925	-		BT4117	0.48	-1.6
5,392,050	-		BT4117	0.64	-1.9
5,392,128	+		BT4117	0.73	-2.3
5,392,129	-		BT4117	0.74	-0.0
5,392,150	-		BT4117	0.76	-2.2
5,392,150	-		BT4117	0.76	+1.5
5,392,165	-		BT4117	0.78	-1.8
5,392,184	+		BT4117	0.81	-1.1
5,392,184	+		BT4117	0.81	-1.2
5,392,184	+		BT4117	0.81	-1.3
5,392,185	-		BT4117	0.81	-0.4
5,392,185	-		BT4117	0.81	-2.4
5,392,187	-		BT4117	0.81	-2.6
5,392,208	+		BT4117	0.84	-0.4
5,392,215	+		BT4117	0.84	-0.0
5,392,269	+				+0.2
5,392,287	-				-0.0
5,392,289	+				-2.6
5,392,342	-				-0.0
5,392,367	-				-2.2
5,392,440	-		BT4118	0.12	-2.8
5,392,508	+		BT4118	0.20	-1.9
5,392,508	+		BT4118	0.20	-1.6
5,392,538	+		BT4118	0.24	-3.5
5,392,615	+		BT4118	0.34	-1.0
5,392,625	+		BT4118	0.35	-1.6
5,392,665	+		BT4118	0.40	-2.4
5,392,723	+		BT4118	0.47	+0.3
5,392,837	-		BT4118	0.61	-3.6
5,392,892	-		BT4118	0.68	-3.7
5,392,895	+		BT4118	0.68	-2.2
5,392,912	+		BT4118	0.70	-1.0
5,392,912	+		BT4118	0.70	-0.9
5,392,926	+		BT4118	0.72	-1.0
5,392,927	-		BT4118	0.72	-1.0
5,392,967	-		BT4118	0.77	-1.6
5,393,049	-		BT4118	0.87	-3.0
5,393,078	+				-2.0
5,393,079	-				-0.0
5,393,153	-				+1.3
5,393,153	-				-2.8
5,393,159	+				-0.0
5,393,160	-				-0.0
5,393,160	-				-2.8
5,393,241	+				-0.0
5,393,241	+				-2.0
5,393,317	-				-2.8
5,393,317	-				-2.3
5,393,320	+				-2.9
5,393,331	-				-1.1