Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1255

Experiment: BHIS with Dimethyl Sulfoxide 0.1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 0.1 vol%
1,560,175	-		BT1254	0.37	+0.1
1,560,511	+		BT1254	0.62	-0.9
1,560,631	+		BT1254	0.71	+0.1
1,560,711	-		BT1254	0.76	+0.1
1,560,715	+		BT1254	0.77	-1.4
1,560,725	+		BT1254	0.78	-0.9
1,560,748	+		BT1254	0.79	-1.2
1,560,748	+		BT1254	0.79	+0.1
1,560,819	+		BT1254	0.84	-0.9
1,560,825	-		BT1254	0.85	-1.4
1,560,840	+		BT1254	0.86	-0.9
1,560,840	+		BT1254	0.86	-1.0
1,560,894	-				-1.8
1,560,899	+				-1.3
1,560,910	+				-2.6
1,560,911	-				-1.1
1,560,989	+				-1.3
1,560,994	+				-1.3
1,560,995	-				-0.3
1,561,038	-				-1.9
1,561,044	+				-1.5
1,561,045	-				+0.1
1,561,051	+				-1.1
1,561,097	+				-1.3
1,561,110	+				+0.1
1,561,132	+				+0.1
1,561,170	-				-1.5
1,561,369	+		BT1255	0.37	-1.9
1,561,369	+		BT1255	0.37	-1.9
1,561,370	-		BT1255	0.37	-1.9
1,561,467	-		BT1255	0.54	-1.4
1,561,473	-		BT1255	0.55	-2.4
1,561,615	-		BT1255	0.79	-0.3
1,561,641	-		BT1255	0.83	+0.6
1,561,641	-		BT1255	0.83	-2.3
1,561,641	-		BT1255	0.83	-2.3
1,561,652	+		BT1255	0.85	-3.1
1,561,653	-		BT1255	0.85	-2.5
1,561,799	+		BT1256	0.22	+0.1
1,561,800	-		BT1256	0.22	-1.4
1,562,020	-				-1.9
1,562,178	+				-0.9
1,562,179	-				-0.4
1,562,231	+				-3.3
1,562,236	+				-1.9
1,562,238	+				-1.9
1,562,240	+				-0.7
1,562,287	-		BT1257	0.13	-0.9
1,562,292	+		BT1257	0.15	+1.1
1,562,330	+		BT1257	0.23	-1.5
1,562,383	+		BT1257	0.34	-0.2
1,562,446	+		BT1257	0.47	-0.6
1,562,479	+		BT1257	0.54	-1.9
1,562,482	-		BT1257	0.55	+0.6
1,562,577	-		BT1257	0.75	+0.1
1,562,580	+		BT1257	0.76	-0.4
1,562,580	+		BT1257	0.76	-1.8
1,562,581	-		BT1257	0.76	-2.5
1,562,581	-		BT1257	0.76	-2.5
1,562,639	+		BT1257	0.89	-0.4
1,562,653	-				-0.5
1,562,731	-				-0.0