Experiment: MoYLS4 media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2908 and DvMF_2909 are separated by 164 nucleotides DvMF_2909 and DvMF_2910 overlap by 4 nucleotides
DvMF_2908: DvMF_2908 - MJ0042 family finger-like protein (RefSeq), at 3,675,060 to 3,676,760
_2908
DvMF_2909: DvMF_2909 - hypothetical protein (RefSeq), at 3,676,925 to 3,678,436
_2909
DvMF_2910: DvMF_2910 - glycosyl transferase group 1 (RefSeq), at 3,678,433 to 3,679,689
_2910
Position (kb)
3676
3677
3678
3679 Strain fitness (log2 ratio)
-1
0
1 at 3676.077 kb on - strand, within DvMF_2908 at 3676.757 kb on - strand at 3676.800 kb on - strand at 3676.850 kb on + strand at 3676.853 kb on - strand at 3677.000 kb on + strand at 3677.108 kb on + strand, within DvMF_2909 at 3677.113 kb on + strand, within DvMF_2909 at 3677.597 kb on + strand, within DvMF_2909 at 3678.152 kb on - strand, within DvMF_2909 at 3678.247 kb on + strand, within DvMF_2909 at 3678.329 kb on + strand at 3678.337 kb on - strand at 3678.589 kb on + strand, within DvMF_2910 at 3678.683 kb on + strand, within DvMF_2910 at 3679.017 kb on - strand, within DvMF_2910 at 3679.075 kb on - strand, within DvMF_2910 at 3679.080 kb on - strand, within DvMF_2910 at 3679.173 kb on + strand, within DvMF_2910 at 3679.189 kb on - strand, within DvMF_2910 at 3679.309 kb on + strand, within DvMF_2910 at 3679.327 kb on + strand, within DvMF_2910 at 3679.357 kb on + strand, within DvMF_2910 at 3679.384 kb on + strand, within DvMF_2910
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media remove 3,676,077 - DvMF_2908 0.60 -0.2 3,676,757 - -1.1 3,676,800 - +0.0 3,676,850 + -0.7 3,676,853 - -1.7 3,677,000 + -0.3 3,677,108 + DvMF_2909 0.12 -0.1 3,677,113 + DvMF_2909 0.12 -0.1 3,677,597 + DvMF_2909 0.44 +1.0 3,678,152 - DvMF_2909 0.81 -0.1 3,678,247 + DvMF_2909 0.87 +0.6 3,678,329 + +0.5 3,678,337 - -0.3 3,678,589 + DvMF_2910 0.12 +0.4 3,678,683 + DvMF_2910 0.20 +0.1 3,679,017 - DvMF_2910 0.46 -0.3 3,679,075 - DvMF_2910 0.51 -0.2 3,679,080 - DvMF_2910 0.51 -0.3 3,679,173 + DvMF_2910 0.59 -0.4 3,679,189 - DvMF_2910 0.60 -0.7 3,679,309 + DvMF_2910 0.70 -0.4 3,679,327 + DvMF_2910 0.71 -1.3 3,679,357 + DvMF_2910 0.74 -1.5 3,679,384 + DvMF_2910 0.76 -0.4
Or see this region's nucleotide sequence