Experiment: MoYLS4 media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2213 and DvMF_2214 are separated by 103 nucleotides DvMF_2214 and fliP are separated by 139 nucleotides fliP and DvMF_2216 are separated by 13 nucleotides DvMF_2216 and DvMF_2217 are separated by 179 nucleotides
DvMF_2213: DvMF_2213 - flagellar motor switch protein FliN (RefSeq), at 2,766,541 to 2,767,083
_2213
DvMF_2214: DvMF_2214 - flagellar biosynthesis protein FliO (RefSeq), at 2,767,187 to 2,767,762
_2214
DvMF_2215: fliP - flagellar biosynthesis protein FliP (RefSeq), at 2,767,902 to 2,768,783
fliP
DvMF_2216: DvMF_2216 - flagellar biosynthetic protein FliQ (RefSeq), at 2,768,797 to 2,769,066
_2216
DvMF_2217: DvMF_2217 - tRNA/rRNA methyltransferase (SpoU) (RefSeq), at 2,769,246 to 2,770,280
_2217
Position (kb)
2767
2768
2769 Strain fitness (log2 ratio)
-1
0
1
2 at 2766.914 kb on - strand, within DvMF_2213 at 2766.916 kb on + strand, within DvMF_2213 at 2766.996 kb on + strand, within DvMF_2213 at 2767.267 kb on - strand, within DvMF_2214 at 2767.427 kb on - strand, within DvMF_2214 at 2767.529 kb on - strand, within DvMF_2214 at 2767.854 kb on + strand at 2768.096 kb on + strand, within fliP at 2768.133 kb on - strand, within fliP at 2768.133 kb on - strand, within fliP at 2768.136 kb on + strand, within fliP at 2768.299 kb on - strand, within fliP at 2768.315 kb on - strand, within fliP at 2768.466 kb on - strand, within fliP at 2768.575 kb on + strand, within fliP at 2768.892 kb on - strand, within DvMF_2216 at 2769.297 kb on - strand at 2769.309 kb on - strand at 2769.353 kb on - strand, within DvMF_2217 at 2769.617 kb on - strand, within DvMF_2217
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media remove 2,766,914 - DvMF_2213 0.69 +0.6 2,766,916 + DvMF_2213 0.69 +2.0 2,766,996 + DvMF_2213 0.84 +0.9 2,767,267 - DvMF_2214 0.14 +0.8 2,767,427 - DvMF_2214 0.42 +1.1 2,767,529 - DvMF_2214 0.59 +1.0 2,767,854 + +1.2 2,768,096 + fliP DvMF_2215 0.22 +1.3 2,768,133 - fliP DvMF_2215 0.26 +1.2 2,768,133 - fliP DvMF_2215 0.26 +1.3 2,768,136 + fliP DvMF_2215 0.27 +1.2 2,768,299 - fliP DvMF_2215 0.45 +1.0 2,768,315 - fliP DvMF_2215 0.47 +1.2 2,768,466 - fliP DvMF_2215 0.64 +1.4 2,768,575 + fliP DvMF_2215 0.76 +1.4 2,768,892 - DvMF_2216 0.35 +1.4 2,769,297 - -0.6 2,769,309 - -0.5 2,769,353 - DvMF_2217 0.10 -0.7 2,769,617 - DvMF_2217 0.36 -0.4
Or see this region's nucleotide sequence