Experiment: MoYLS4 media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1718 and DvMF_1719 are separated by 369 nucleotides DvMF_1719 and DvMF_1720 are separated by 470 nucleotides
DvMF_1718: DvMF_1718 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 2,099,117 to 2,101,108
_1718
DvMF_1719: DvMF_1719 - metal dependent phosphohydrolase (RefSeq), at 2,101,478 to 2,102,686
_1719
DvMF_1720: DvMF_1720 - diguanylate phosphodiesterase (RefSeq), at 2,103,157 to 2,104,395
_1720
Position (kb)
2101
2102
2103 Strain fitness (log2 ratio)
-1
0
1 at 2100.753 kb on + strand, within DvMF_1718 at 2100.802 kb on - strand, within DvMF_1718 at 2101.017 kb on - strand at 2101.476 kb on + strand at 2101.476 kb on + strand at 2101.484 kb on - strand at 2101.525 kb on + strand at 2101.533 kb on - strand at 2101.770 kb on + strand, within DvMF_1719 at 2101.796 kb on + strand, within DvMF_1719 at 2101.804 kb on - strand, within DvMF_1719 at 2101.817 kb on - strand, within DvMF_1719 at 2101.837 kb on - strand, within DvMF_1719 at 2101.847 kb on - strand, within DvMF_1719 at 2101.854 kb on - strand, within DvMF_1719 at 2101.990 kb on + strand, within DvMF_1719 at 2102.204 kb on - strand, within DvMF_1719 at 2102.283 kb on + strand, within DvMF_1719 at 2102.333 kb on + strand, within DvMF_1719 at 2102.341 kb on - strand, within DvMF_1719 at 2102.490 kb on - strand, within DvMF_1719 at 2102.603 kb on - strand at 2103.178 kb on - strand at 2103.271 kb on - strand at 2103.271 kb on - strand at 2103.457 kb on + strand, within DvMF_1720 at 2103.465 kb on - strand, within DvMF_1720 at 2103.467 kb on + strand, within DvMF_1720 at 2103.586 kb on - strand, within DvMF_1720
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media remove 2,100,753 + DvMF_1718 0.82 -1.1 2,100,802 - DvMF_1718 0.85 -0.7 2,101,017 - -0.3 2,101,476 + -0.9 2,101,476 + -0.5 2,101,484 - +0.1 2,101,525 + -0.8 2,101,533 - +0.5 2,101,770 + DvMF_1719 0.24 +0.1 2,101,796 + DvMF_1719 0.26 -0.1 2,101,804 - DvMF_1719 0.27 +0.8 2,101,817 - DvMF_1719 0.28 +0.2 2,101,837 - DvMF_1719 0.30 -0.3 2,101,847 - DvMF_1719 0.31 -0.8 2,101,854 - DvMF_1719 0.31 +0.2 2,101,990 + DvMF_1719 0.42 -0.3 2,102,204 - DvMF_1719 0.60 +0.2 2,102,283 + DvMF_1719 0.67 +0.3 2,102,333 + DvMF_1719 0.71 +0.1 2,102,341 - DvMF_1719 0.71 +0.2 2,102,490 - DvMF_1719 0.84 +0.1 2,102,603 - +0.2 2,103,178 - -0.2 2,103,271 - -0.5 2,103,271 - -0.4 2,103,457 + DvMF_1720 0.24 +0.1 2,103,465 - DvMF_1720 0.25 -0.0 2,103,467 + DvMF_1720 0.25 -0.1 2,103,586 - DvMF_1720 0.35 -0.2
Or see this region's nucleotide sequence