Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3678

Experiment: BHIS with Antimycin A 0.1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Antimycin A 0.1 mM
4,773,049	-		BT3677	0.67	-1.4
4,773,051	+		BT3677	0.67	-2.7
4,773,061	+		BT3677	0.68	-2.4
4,773,063	+		BT3677	0.68	-1.4
4,773,064	-		BT3677	0.68	-1.7
4,773,077	-		BT3677	0.69	-1.3
4,773,167	+		BT3677	0.73	-1.1
4,773,167	+		BT3677	0.73	-1.5
4,773,180	+		BT3677	0.74	-0.1
4,773,246	-		BT3677	0.77	-1.1
4,773,365	+		BT3677	0.83	-0.7
4,773,443	+		BT3677	0.87	-1.6
4,773,463	-		BT3677	0.88	-1.1
4,773,467	+		BT3677	0.88	-0.4
4,773,470	-		BT3677	0.88	-0.2
4,773,471	+		BT3677	0.88	-1.1
4,773,471	+		BT3677	0.88	+1.2
4,773,472	-		BT3677	0.88	-2.7
4,773,556	+				-0.1
4,773,604	-				+0.1
4,773,639	+				-0.1
4,773,652	+				-1.1
4,773,701	+				+0.5
4,773,766	+				-1.1
4,773,767	-				-1.6
4,773,781	+				-0.6
4,773,789	+				-0.3
4,773,791	+				-0.1
4,773,792	-				-3.1
4,773,792	-				-0.4
4,773,822	+				-2.7
4,773,823	-				-0.9
4,773,823	-				-0.1
4,773,897	+				+0.9
4,773,900	-				-0.1
4,773,945	-				-2.7
4,773,945	-				-0.6
4,773,975	+				-3.6
4,773,975	+				+0.9
4,773,976	-				-2.4
4,773,978	-				-1.9
4,774,022	-				-0.1
4,774,080	+				-0.1
4,774,080	+				-2.7
4,774,081	-				-1.3
4,774,081	-				-1.7
4,774,113	+				-0.1
4,774,113	+				-0.5
4,774,168	-				-0.9
4,774,168	-				-1.4
4,774,169	+				-0.1
4,774,169	+				-1.9
4,774,170	-				-1.5
4,774,170	-				-1.7
4,774,177	-				+0.5
4,774,227	-				-1.2
4,774,257	-				-1.7
4,774,259	+				+0.3
4,774,307	+				+0.9
4,774,324	+				-0.1
4,774,344	+				-0.1
4,774,361	-		BT3678	0.10	-1.1
4,774,392	-		BT3678	0.11	-0.8
4,774,392	-		BT3678	0.11	-1.4
4,774,429	-		BT3678	0.12	-0.1
4,774,429	-		BT3678	0.12	-0.1
4,774,493	-		BT3678	0.13	-0.1
4,774,513	+		BT3678	0.14	+1.5
4,774,561	+		BT3678	0.15	-3.1
4,774,586	+		BT3678	0.15	-1.1
4,774,598	-		BT3678	0.16	-2.3
4,774,598	-		BT3678	0.16	-2.9
4,774,633	+		BT3678	0.17	-0.1
4,774,646	+		BT3678	0.17	-0.2
4,774,646	+		BT3678	0.17	-1.4
4,774,649	+		BT3678	0.17	-0.1
4,774,650	-		BT3678	0.17	-0.5
4,774,659	-		BT3678	0.17	-1.7
4,774,659	-		BT3678	0.17	-0.4
4,774,680	+		BT3678	0.18	-1.9
4,774,680	+		BT3678	0.18	-0.1
4,774,729	-		BT3678	0.19	-1.1
4,774,779	-		BT3678	0.20	-0.9
4,774,780	+		BT3678	0.20	-1.4
4,774,781	-		BT3678	0.20	-2.4
4,774,781	-		BT3678	0.20	-0.6
4,774,783	+		BT3678	0.20	-1.7
4,774,783	+		BT3678	0.20	-0.1
4,774,785	+		BT3678	0.20	-0.1
4,774,785	+		BT3678	0.20	-0.7
4,774,785	+		BT3678	0.20	-1.1
4,774,791	-		BT3678	0.20	-1.1
4,774,791	-		BT3678	0.20	-0.1
4,774,792	+		BT3678	0.20	-1.1
4,774,802	+		BT3678	0.21	-1.9
4,774,830	-		BT3678	0.21	-1.1
4,774,836	-		BT3678	0.21	+0.0
4,774,847	+		BT3678	0.22	+0.7
4,774,881	-		BT3678	0.23	-0.7
4,774,884	+		BT3678	0.23	-0.1
4,774,885	-		BT3678	0.23	-2.0
4,774,959	-		BT3678	0.24	-0.5
4,774,959	-		BT3678	0.24	-1.1
4,775,000	+		BT3678	0.25	-0.1
4,775,012	+		BT3678	0.26	-1.4
4,775,027	+		BT3678	0.26	-1.1
4,775,028	-		BT3678	0.26	-0.1
4,775,028	-		BT3678	0.26	-3.3
4,775,033	+		BT3678	0.26	+0.0
4,775,052	-		BT3678	0.27	-3.8
4,775,072	+		BT3678	0.27	-1.8
4,775,072	+		BT3678	0.27	-0.1
4,775,077	+		BT3678	0.27	-1.9
4,775,142	+		BT3678	0.29	-2.0
4,775,158	+		BT3678	0.29	-3.3
4,775,166	+		BT3678	0.29	-1.3
4,775,259	-		BT3678	0.32	-2.3
4,775,262	+		BT3678	0.32	-0.1
4,775,262	+		BT3678	0.32	-0.1
4,775,262	+		BT3678	0.32	-0.7
4,775,263	-		BT3678	0.32	-1.1
4,775,263	-		BT3678	0.32	-0.4
4,775,277	+		BT3678	0.32	-1.7
4,775,278	-		BT3678	0.32	-0.6
4,775,281	+		BT3678	0.32	-1.7
4,775,361	+		BT3678	0.34	-0.6
4,775,371	-		BT3678	0.34	-0.9
4,775,465	+		BT3678	0.37	-0.7
4,775,466	-		BT3678	0.37	-0.6
4,775,466	-		BT3678	0.37	-1.3
4,775,486	-		BT3678	0.37	-2.0
4,775,487	+		BT3678	0.37	-1.1
4,775,488	-		BT3678	0.37	-0.3
4,775,488	-		BT3678	0.37	-0.5
4,775,491	+		BT3678	0.37	-2.5
4,775,491	+		BT3678	0.37	-1.0
4,775,498	+		BT3678	0.37	-3.1
4,775,499	-		BT3678	0.37	-0.1
4,775,503	+		BT3678	0.38	-1.5
4,775,503	+		BT3678	0.38	-1.6
4,775,605	-		BT3678	0.40	-1.9
4,775,626	+		BT3678	0.41	+1.5
4,775,650	+		BT3678	0.41	-0.1
4,775,650	+		BT3678	0.41	-1.1
4,775,704	-		BT3678	0.42	-0.6
4,775,710	-		BT3678	0.43	-0.4
4,775,711	+		BT3678	0.43	-1.1
4,775,717	+		BT3678	0.43	-0.1
4,775,717	+		BT3678	0.43	-1.4
4,775,751	+		BT3678	0.44	-1.1
4,775,751	+		BT3678	0.44	-1.7
4,775,751	+		BT3678	0.44	-1.5
4,775,751	+		BT3678	0.44	-0.1
4,775,751	+		BT3678	0.44	-0.1
4,775,751	+		BT3678	0.44	-1.7
4,775,752	-		BT3678	0.44	-1.7
4,775,752	-		BT3678	0.44	-2.5
4,775,783	-		BT3678	0.44	-0.1
4,775,807	-		BT3678	0.45	-0.5
4,775,877	-		BT3678	0.47	-2.9
4,775,881	-		BT3678	0.47	-0.1
4,775,963	+		BT3678	0.49	-2.0
4,776,001	+		BT3678	0.50	-0.7
4,776,002	-		BT3678	0.50	-1.9
4,776,002	-		BT3678	0.50	-2.9
4,776,036	-		BT3678	0.50	-1.8
4,776,038	+		BT3678	0.50	-0.8
4,776,039	-		BT3678	0.51	-0.9
4,776,107	+		BT3678	0.52	-0.1
4,776,112	-		BT3678	0.52	-1.1
4,776,113	+		BT3678	0.52	+1.2
4,776,114	-		BT3678	0.52	-1.5
4,776,142	-		BT3678	0.53	-2.7
4,776,173	+		BT3678	0.54	-2.7
4,776,174	-		BT3678	0.54	-2.1
4,776,178	-		BT3678	0.54	-0.3
4,776,214	+		BT3678	0.55	-1.6
4,776,241	-		BT3678	0.55	-0.1
4,776,267	+		BT3678	0.56	-1.1
4,776,272	+		BT3678	0.56	+0.9
4,776,297	-		BT3678	0.57	+2.2
4,776,342	+		BT3678	0.58	+1.0
4,776,342	+		BT3678	0.58	-1.0
4,776,346	+		BT3678	0.58	-1.2
4,776,347	-		BT3678	0.58	+0.5
4,776,364	+		BT3678	0.58	-0.4
4,776,387	-		BT3678	0.59	-2.9
4,776,409	-		BT3678	0.59	-1.0
4,776,416	-		BT3678	0.60	-1.7
4,776,418	+		BT3678	0.60	-1.4
4,776,421	+		BT3678	0.60	-0.1
4,776,449	+		BT3678	0.60	-0.1
4,776,465	-		BT3678	0.61	-1.3
4,776,465	-		BT3678	0.61	-2.7
4,776,466	+		BT3678	0.61	-0.1
4,776,467	-		BT3678	0.61	-1.7
4,776,549	-		BT3678	0.63	-0.7
4,776,568	+		BT3678	0.63	-0.9
4,776,633	-		BT3678	0.65	-1.0
4,776,643	-		BT3678	0.65	-1.0
4,776,662	+		BT3678	0.66	-0.3
4,776,662	+		BT3678	0.66	-0.4
4,776,663	-		BT3678	0.66	+0.3
4,776,664	+		BT3678	0.66	-3.4
4,776,722	+		BT3678	0.67	-2.7
4,776,753	-		BT3678	0.68	-2.8
4,776,809	+		BT3678	0.69	-1.7
4,776,809	+		BT3678	0.69	-1.7
4,776,810	-		BT3678	0.69	-0.1
4,776,869	+		BT3678	0.71	-0.1
4,776,902	+		BT3678	0.71	-0.1
4,776,902	+		BT3678	0.71	+1.9
4,776,903	-		BT3678	0.71	-0.7
4,776,903	-		BT3678	0.71	-1.1
4,776,903	-		BT3678	0.71	-0.1
4,776,916	-		BT3678	0.72	-2.7
4,776,921	-		BT3678	0.72	-0.9
4,776,954	+		BT3678	0.73	+0.5
4,777,076	+		BT3678	0.76	-0.1
4,777,179	-		BT3678	0.78	+1.2
4,777,206	+		BT3678	0.79	-0.2
4,777,209	+		BT3678	0.79	-1.7
4,777,323	-		BT3678	0.81	-2.7
4,777,328	+		BT3678	0.82	-1.7
4,777,333	+		BT3678	0.82	-1.7
4,777,333	+		BT3678	0.82	-3.4
4,777,333	+		BT3678	0.82	-1.8
4,777,346	+		BT3678	0.82	-1.7
4,777,357	+		BT3678	0.82	-1.3
4,777,358	-		BT3678	0.82	-1.7
4,777,392	+		BT3678	0.83	-1.0
4,777,435	+		BT3678	0.84	-1.9
4,777,496	+		BT3678	0.86	-2.1
4,777,513	-		BT3678	0.86	-2.4
4,777,597	-		BT3678	0.88	-0.1
4,777,622	+		BT3678	0.89	-0.1
4,777,658	+		BT3678	0.90	-0.1
4,777,677	+				-1.4
4,777,677	+				-0.9
4,777,679	+				-2.7
4,777,775	+				-2.1
4,777,791	-				-1.7
4,777,845	-				-0.1
4,777,857	-				-0.1
4,777,862	-				-2.2
4,777,863	+				+0.1
4,777,937	+				-0.1
4,777,937	+				-1.6
4,777,961	+				-1.1
4,777,987	-				-1.0
4,778,009	+				+0.6
4,778,009	+				-1.0
4,778,046	-				-1.7
4,778,064	-				-1.7
4,778,087	-				-0.6
4,778,094	+				-1.2
4,778,095	-				-2.1
4,778,095	-				-0.5
4,778,110	-				+1.2
4,778,138	-				-0.1
4,778,202	-				-2.4
4,778,224	-				-2.1
4,778,256	+				-0.1
4,778,259	+				-0.5
4,778,280	+				-2.1
4,778,304	-				-2.9
4,778,319	+				-3.1
4,778,319	+				-2.7
4,778,321	+				-1.4
4,778,341	+				-1.1
4,778,342	-				-1.7
4,778,344	-				-0.2
4,778,364	-				-1.1
4,778,364	-				-1.1
4,778,378	+				-0.1
4,778,382	-				-3.3
4,778,382	-				-1.3
4,778,410	-				+0.2
4,778,414	-				-0.4
4,778,478	-				-0.8
4,778,480	-				-2.4
4,778,480	-				-1.6
4,778,504	+				-1.7
4,778,512	-				-0.1
4,778,561	+				-1.1
4,778,568	+				-2.4
4,778,704	+				-0.1
4,778,711	-				+0.9
4,778,720	-				-1.0
4,778,825	+				-1.1
4,778,826	-				-0.1
4,778,826	-				-0.5
4,778,971	-		BT3679	0.19	-0.1
4,778,975	-		BT3679	0.19	-2.1
4,778,982	+		BT3679	0.20	+0.6
4,778,982	+		BT3679	0.20	-4.0
4,778,982	+		BT3679	0.20	-2.7
4,778,983	-		BT3679	0.20	-1.9
4,778,983	-		BT3679	0.20	+1.5
4,778,983	-		BT3679	0.20	-1.7
4,778,983	-		BT3679	0.20	-1.1
4,778,995	+		BT3679	0.21	-1.1
4,778,996	-		BT3679	0.21	-1.8
4,779,005	+		BT3679	0.21	-2.4
4,779,052	-		BT3679	0.25	-1.4