Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3675

Experiment: BHIS with Antimycin A 0.1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Antimycin A 0.1 mM
4,767,815	-		BT3674	0.57	-0.1
4,767,863	+		BT3674	0.59	-1.1
4,767,864	-		BT3674	0.59	+0.5
4,767,864	-		BT3674	0.59	-0.1
4,767,864	-		BT3674	0.59	-1.1
4,767,865	+		BT3674	0.59	-3.3
4,767,865	+		BT3674	0.59	-2.7
4,767,865	+				-1.7
4,767,866	-		BT3674	0.59	+0.1
4,767,866	-		BT3674	0.59	-1.7
4,767,866	-		BT3674	0.59	-1.5
4,767,867	+		BT3674	0.59	-2.4
4,767,876	+		BT3674	0.60	-0.5
4,767,906	+		BT3674	0.61	-1.7
4,767,907	-		BT3674	0.61	-1.7
4,767,930	-		BT3674	0.62	-1.0
4,767,931	+		BT3674	0.63	+0.1
4,767,931	+		BT3674	0.63	-1.6
4,767,932	-		BT3674	0.63	-0.6
4,767,932	-		BT3674	0.63	-1.0
4,767,950	+		BT3674	0.63	-1.5
4,767,950	+		BT3674	0.63	-0.9
4,767,951	-		BT3674	0.64	-1.3
4,767,952	+		BT3674	0.64	-2.3
4,768,061	-		BT3674	0.69	-0.9
4,768,156	+		BT3674	0.74	-0.9
4,768,177	-		BT3674	0.75	-3.1
4,768,196	-		BT3674	0.76	-0.1
4,768,343	-		BT3674	0.83	-0.7
4,768,343	-		BT3674	0.83	-1.4
4,768,343	-		BT3674	0.83	-2.8
4,768,381	+		BT3674	0.85	-0.4
4,768,437	+		BT3674	0.88	-0.7
4,768,444	+		BT3674	0.88	-1.2
4,768,445	-		BT3674	0.88	-1.1
4,768,445	-		BT3674	0.88	-1.3
4,768,470	+		BT3674	0.89	-2.7
4,768,470	+		BT3674	0.89	-0.8
4,768,527	+				-1.7
4,768,603	-				-0.1
4,768,604	+				-2.1
4,768,686	-				-1.7
4,768,689	-				-2.1
4,768,697	+				-2.4
4,768,722	-				-1.1
4,768,728	+				-1.1
4,768,839	-		BT3675	0.12	-1.4
4,768,841	-		BT3675	0.12	-1.1
4,768,847	+		BT3675	0.13	-1.4
4,768,898	+		BT3675	0.18	-2.2
4,768,898	+		BT3675	0.18	-1.2
4,768,928	-		BT3675	0.21	-1.7
4,768,928	-		BT3675	0.21	-1.5
4,768,930	+		BT3675	0.21	-0.5
4,769,017	+		BT3675	0.30	-1.7
4,769,018	-		BT3675	0.30	-0.1
4,769,051	+		BT3675	0.33	-2.2
4,769,051	+		BT3675	0.33	-2.9
4,769,055	+		BT3675	0.33	-1.7
4,769,060	+		BT3675	0.34	-0.7
4,769,061	-		BT3675	0.34	-0.6
4,769,079	+		BT3675	0.36	-1.4
4,769,110	+		BT3675	0.39	-0.1
4,769,110	+		BT3675	0.39	-0.9
4,769,113	+		BT3675	0.39	-1.0
4,769,196	-		BT3675	0.48	+0.2
4,769,225	-		BT3675	0.50	-2.4
4,769,275	-		BT3675	0.55	-2.1
4,769,329	+		BT3675	0.61	+2.2
4,769,365	-		BT3675	0.64	-2.1
4,769,366	+		BT3675	0.64	-1.0
4,769,385	-		BT3675	0.66	-4.5
4,769,385	-		BT3675	0.66	+0.5
4,769,565	+		BT3675	0.84	-1.1
4,769,591	+		BT3675	0.87	-0.1
4,769,592	-		BT3675	0.87	-1.4
4,769,597	-		BT3675	0.88	-0.1
4,769,623	+				-0.7
4,769,624	-				-2.4
4,769,647	-				-0.8
4,769,683	+				-2.1
4,769,729	-				+0.9
4,769,729	-				-0.4
4,769,747	+				-1.3
4,769,748	-				-2.9
4,769,752	+				-1.7
4,769,793	+				-2.9
4,769,794	-				-2.2
4,769,797	+				-0.1
4,769,797	+				-0.1
4,769,846	-				-1.1
4,769,889	+				-0.8
4,770,018	+				-2.7
4,770,042	+				-0.1
4,770,043	-				-0.4
4,770,117	-		BT3676	0.10	-1.7
4,770,138	+		BT3676	0.12	-2.4
4,770,149	+		BT3676	0.12	-0.7
4,770,149	+		BT3676	0.12	-1.8
4,770,150	-		BT3676	0.12	-0.1
4,770,150	-		BT3676	0.12	-1.7
4,770,150	-		BT3676	0.12	-0.1
4,770,159	-				-1.1
4,770,160	+		BT3676	0.13	-1.3
4,770,225	+		BT3676	0.17	-1.1
4,770,298	+		BT3676	0.21	-2.4
4,770,299	-		BT3676	0.21	-1.1
4,770,338	+		BT3676	0.23	-1.7
4,770,347	-		BT3676	0.24	-0.4
4,770,347	-		BT3676	0.24	-4.0
4,770,420	-		BT3676	0.28	+0.6
4,770,434	-		BT3676	0.28	-1.4
4,770,457	+		BT3676	0.30	-0.1
4,770,457	+		BT3676	0.30	-3.4
4,770,457	+		BT3676	0.30	-1.4
4,770,458	-		BT3676	0.30	-0.1
4,770,462	-		BT3676	0.30	-1.4
4,770,462	-		BT3676	0.30	-0.6
4,770,562	-		BT3676	0.36	+0.5
4,770,598	+		BT3676	0.38	-2.7
4,770,623	+		BT3676	0.39	-1.7
4,770,632	+		BT3676	0.40	-3.1
4,770,633	-		BT3676	0.40	-0.7
4,770,634	+		BT3676	0.40	-0.9
4,770,664	+		BT3676	0.42	-0.1
4,770,686	-		BT3676	0.43	-0.1