Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4461

Experiment: Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.05 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.05 vol%
5,871,010	+		BT4460	0.29	-1.2
5,871,038	-		BT4460	0.31	-0.9
5,871,040	+		BT4460	0.32	+0.1
5,871,041	-		BT4460	0.32	-0.9
5,871,079	+		BT4460	0.34	-0.8
5,871,080	-		BT4460	0.35	-1.1
5,871,080	-		BT4460	0.35	+0.1
5,871,087	+		BT4460	0.35	+0.6
5,871,087	+		BT4460	0.35	-1.4
5,871,111	+		BT4460	0.37	-3.2
5,871,111	+		BT4460	0.37	+1.2
5,871,133	-		BT4460	0.38	-0.9
5,871,135	-		BT4460	0.39	+0.2
5,871,135	-		BT4460	0.39	-0.2
5,871,148	+		BT4460	0.40	+0.1
5,871,149	-		BT4460	0.40	+0.1
5,871,224	+		BT4460	0.45	+0.1
5,871,225	-		BT4460	0.45	-0.7
5,871,341	-		BT4460	0.54	-0.9
5,871,351	+		BT4460	0.55	+1.1
5,871,456	+		BT4460	0.62	-0.5
5,871,457	-		BT4460	0.62	-0.8
5,871,471	+		BT4460	0.63	-0.9
5,871,542	-		BT4460	0.69	-0.9
5,871,542	-		BT4460	0.69	-1.5
5,871,542	-		BT4460	0.69	-1.4
5,871,543	+		BT4460	0.69	+1.1
5,871,666	+		BT4460	0.78	-0.5
5,871,670	+		BT4460	0.78	-1.9
5,871,670	+		BT4460	0.78	-1.3
5,871,694	-		BT4460	0.80	-0.8
5,871,713	+				-0.9
5,871,734	-		BT4460	0.83	-1.9
5,871,734	-		BT4460	0.83	+1.1
5,871,770	+		BT4460	0.86	-0.8
5,871,771	-		BT4460	0.86	+0.1
5,871,775	-		BT4460	0.86	-0.9
5,871,848	-				-1.5
5,871,944	-				+0.1
5,871,944	-				+1.6
5,871,963	+				-1.5
5,872,094	+		BT4461	0.23	-2.3
5,872,183	-		BT4461	0.39	-1.3
5,872,211	+		BT4461	0.44	-1.7
5,872,215	-		BT4461	0.45	+0.1
5,872,411	+		BT4461	0.79	-1.8
5,872,426	+		BT4461	0.81	+0.1
5,872,435	+		BT4461	0.83	-2.1
5,872,436	-		BT4461	0.83	-1.9
5,872,472	+		BT4461	0.89	-1.4
5,872,473	-		BT4461	0.90	-2.2
5,872,519	-				-0.9
5,872,566	+				+0.1
5,872,566	+				-2.8
5,872,735	+		BT4462	0.30	+0.1
5,872,975	-		BT4462	0.67	-0.5
5,873,162	-				+0.1
5,873,162	-				+0.1
5,873,164	-				-1.4
5,873,165	+				-2.9
5,873,168	+				-2.6
5,873,221	+				+0.1
5,873,231	-				-2.9
5,873,313	-		BT4463	0.10	+1.1
5,873,313	-		BT4463	0.10	+0.1
5,873,313	-		BT4463	0.10	-1.4
5,873,313	-		BT4463	0.10	-1.1
5,873,362	-		BT4463	0.15	-2.4
5,873,449	+		BT4463	0.24	+0.1
5,873,449	+		BT4463	0.24	-1.4
5,873,455	-		BT4463	0.25	-0.9
5,873,494	+		BT4463	0.29	-1.9