Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_006397

Experiment: Acetylated xylan 10 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetylated xylan 10 g/L (C)
2,773,776	+				+1.2
2,773,839	+				+0.2
2,774,098	+				-2.7
2,774,179	+				-0.5
2,774,356	-		ABIE53_006396	0.21	+1.1
2,774,382	-		ABIE53_006396	0.28	-2.6
2,774,404	-		ABIE53_006396	0.34	+1.1
2,774,667	+				-0.4
2,774,667	+				-2.7
2,774,679	-				+1.1
2,774,689	+				-0.6
2,774,690	-				-3.2
2,774,690	-				-2.3
2,774,690	-				+1.1
2,774,696	-				-0.1
2,774,696	-				+1.1
2,774,741	+				+1.1
2,774,742	-				-0.9
2,774,956	+		ABIE53_006397	0.27	-3.3
2,775,024	+		ABIE53_006397	0.36	-1.2
2,775,024	+		ABIE53_006397	0.36	-1.9
2,775,025	-		ABIE53_006397	0.36	-2.7
2,775,145	-		ABIE53_006397	0.52	-4.0
2,775,325	-		ABIE53_006397	0.76	+1.1
2,775,516	+				+2.7
2,775,517	-				+4.1
2,775,539	+				-2.4
2,775,539	+				-1.2
2,775,552	+				+0.1
2,775,552	+				+1.1
2,775,625	+				+0.1
2,775,666	+				-0.4
2,775,715	-		ABIE53_006398	0.12	-0.4
2,775,736	+		ABIE53_006398	0.14	-2.3
2,775,736	+		ABIE53_006398	0.14	-0.4
2,775,736	+		ABIE53_006398	0.14	-1.2
2,775,737	-		ABIE53_006398	0.14	-1.4