Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005768

Experiment: Acetylated xylan 10 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetylated xylan 10 g/L (C)
2,067,121	+				+1.2
2,067,121	+				-0.8
2,067,151	+				+0.2
2,067,356	+		ABIE53_005767	0.19	+0.4
2,067,357	-		ABIE53_005767	0.20	+1.2
2,067,357	-		ABIE53_005767	0.20	+1.2
2,067,357	-		ABIE53_005767	0.20	-1.1
2,067,435	+		ABIE53_005767	0.28	+1.8
2,067,435	+		ABIE53_005767	0.28	+0.6
2,067,502	+		ABIE53_005767	0.36	+1.2
2,067,503	-		ABIE53_005767	0.36	+1.2
2,067,503	-		ABIE53_005767	0.36	+0.2
2,067,503	-		ABIE53_005767	0.36	+1.2
2,067,556	-		ABIE53_005767	0.42	-1.0
2,068,034	+				-0.0
2,068,145	-		ABIE53_005768	0.16	-3.0
2,068,145	-		ABIE53_005768	0.16	-0.9
2,068,155	+		ABIE53_005768	0.22	-0.5
2,068,157	+		ABIE53_005768	0.23	+1.2
2,068,158	-		ABIE53_005768	0.24	-1.8
2,068,165	+		ABIE53_005768	0.28	-2.4
2,068,166	-		ABIE53_005768	0.29	+0.9
2,068,167	+		ABIE53_005768	0.29	-3.0
2,068,168	-		ABIE53_005768	0.30	-2.6
2,068,168	-		ABIE53_005768	0.30	+2.8
2,068,168	-		ABIE53_005768	0.30	+1.2
2,068,168	-		ABIE53_005768	0.30	-0.8
2,068,168	-		ABIE53_005768	0.30	+1.2
2,068,168	-		ABIE53_005768	0.30	-2.0
2,068,221	+		ABIE53_005768	0.61	-1.0
2,068,221	+		ABIE53_005768	0.61	+1.2
2,068,222	-		ABIE53_005768	0.61	+1.2
2,068,347	+				+1.2
2,068,348	-				+1.8
2,068,366	-				-0.8
2,068,366	-				-2.7
2,068,366	-				+3.2
2,068,409	+				-2.0
2,068,410	-				-0.6
2,068,464	+				+1.2
2,068,750	-				+0.3
2,068,750	-				-0.8
2,068,902	+				+2.8
2,068,903	-				+0.2
2,068,918	+				-2.0
2,068,918	+				+1.2
2,069,035	-		ABIE53_005769	0.17	+1.2
2,069,035	-		ABIE53_005769	0.17	+0.2
2,069,052	+		ABIE53_005769	0.20	+0.3