Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003158

Experiment: Acetylated xylan 10 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetylated xylan 10 g/L (C)
3,570,340	-		ABIE53_003157	0.16	-4.5
3,570,516	-		ABIE53_003157	0.33	-2.5
3,570,516	-		ABIE53_003157	0.33	-2.6
3,570,516	-		ABIE53_003157	0.33	-5.0
3,570,516	-		ABIE53_003157	0.33	-2.4
3,570,866	-		ABIE53_003157	0.65	-3.2
3,570,866	-		ABIE53_003157	0.65	-5.0
3,570,866	-		ABIE53_003157	0.65	-0.6
3,570,866	-		ABIE53_003157	0.65	-0.6
3,570,866	-		ABIE53_003157	0.65	-4.5
3,570,866	-		ABIE53_003157	0.65	-5.0
3,570,866	-		ABIE53_003157	0.65	-3.3
3,570,866	-		ABIE53_003157	0.65	-4.7
3,570,915	-		ABIE53_003157	0.69	+1.0
3,570,915	-		ABIE53_003157	0.69	-2.9
3,570,915	-		ABIE53_003157	0.69	-2.8
3,570,915	-		ABIE53_003157	0.69	-3.2
3,570,915	-		ABIE53_003157	0.69	-2.6
3,570,915	-		ABIE53_003157	0.69	-2.2
3,570,939	-		ABIE53_003157	0.72	-3.4
3,570,939	-		ABIE53_003157	0.72	-0.6
3,570,939	-		ABIE53_003157	0.72	-2.8
3,570,939	-		ABIE53_003157	0.72	-4.4
3,570,939	-		ABIE53_003157	0.72	-2.2
3,570,939	-		ABIE53_003157	0.72	-0.6
3,570,939	-		ABIE53_003157	0.72	+1.0
3,570,939	-		ABIE53_003157	0.72	-1.0
3,570,960	-		ABIE53_003157	0.74	-2.6
3,570,960	-		ABIE53_003157	0.74	-3.8
3,570,960	-		ABIE53_003157	0.74	-1.4
3,571,298	-				+0.1
3,571,353	-		ABIE53_003158	0.25	-4.0
3,571,353	-		ABIE53_003158	0.25	+1.0
3,571,353	-		ABIE53_003158	0.25	-1.4
3,571,393	-				-0.0
3,571,395	-				-0.6
3,571,395	-				-0.6
3,571,555	-		ABIE53_003159	0.16	+1.0
3,571,555	-		ABIE53_003159	0.16	-2.2
3,571,555	-		ABIE53_003159	0.16	-0.0
3,571,555	-		ABIE53_003159	0.16	-1.0
3,571,555	-		ABIE53_003159	0.16	+1.0
3,571,555	-		ABIE53_003159	0.16	-0.0
3,571,555	-		ABIE53_003159	0.16	-2.5
3,571,672	-		ABIE53_003159	0.28	-0.0
3,571,672	-		ABIE53_003159	0.28	-0.6
3,571,672	-		ABIE53_003159	0.28	-0.6
3,571,681	-		ABIE53_003159	0.29	-0.6
3,571,681	-		ABIE53_003159	0.29	-0.0
3,571,681	-		ABIE53_003159	0.29	+1.0
3,571,681	-		ABIE53_003159	0.29	-1.6
3,571,681	-		ABIE53_003159	0.29	-0.0
3,571,699	-		ABIE53_003159	0.30	+1.0
3,571,699	-		ABIE53_003159	0.30	-1.9
3,571,699	-		ABIE53_003159	0.30	-0.6
3,571,699	-		ABIE53_003159	0.30	-0.6
3,571,846	-		ABIE53_003159	0.45	-0.0
3,571,846	-		ABIE53_003159	0.45	-3.1
3,571,846	-		ABIE53_003159	0.45	-3.0
3,571,846	-		ABIE53_003159	0.45	-1.9
3,571,846	-		ABIE53_003159	0.45	-1.0
3,571,846	-		ABIE53_003159	0.45	-2.2
3,571,975	-		ABIE53_003159	0.58	-1.0
3,571,975	-		ABIE53_003159	0.58	-1.0
3,571,975	-		ABIE53_003159	0.58	-0.0
3,571,975	-		ABIE53_003159	0.58	-0.6
3,571,975	-		ABIE53_003159	0.58	-1.4
3,571,975	-		ABIE53_003159	0.58	-2.9
3,571,975	-		ABIE53_003159	0.58	-1.4
3,571,975	-		ABIE53_003159	0.58	+1.0
3,571,975	-		ABIE53_003159	0.58	-2.2
3,571,975	-		ABIE53_003159	0.58	-1.0
3,571,975	-		ABIE53_003159	0.58	-2.8
3,571,975	-		ABIE53_003159	0.58	-3.0
3,571,975	-		ABIE53_003159	0.58	-2.8
3,571,975	-		ABIE53_003159	0.58	-1.4
3,571,975	-		ABIE53_003159	0.58	+1.0
3,572,071	-		ABIE53_003159	0.67	-4.2
3,572,071	-		ABIE53_003159	0.67	-0.6
3,572,071	-		ABIE53_003159	0.67	-3.0
3,572,393	-				+0.4