Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001511

Experiment: Acetylated xylan 10 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetylated xylan 10 g/L (C)
1,687,299	-		ABIE53_001510	0.80	-0.9
1,687,299	-		ABIE53_001510	0.80	+1.1
1,687,545	+		ABIE53_001510	0.88	+0.1
1,687,546	-		ABIE53_001510	0.88	+0.1
1,687,546	-		ABIE53_001510	0.88	-3.1
1,687,740	+				-0.5
1,687,741	-				+0.6
1,687,786	+				-0.7
1,687,788	+				-1.8
1,687,788	+				-0.5
1,687,789	-				+1.4
1,687,789	-				+0.1
1,687,873	+				+1.1
1,687,874	-				+0.1
1,687,877	+				+0.8
1,687,877	+				-4.4
1,687,939	+				-1.5
1,688,033	+				+1.1
1,688,033	+				+0.1
1,688,034	-				+0.4
1,688,034	-				-1.7
1,688,056	-				+1.1
1,688,056	-				+1.1
1,688,056	-				+1.1
1,688,070	+				-0.5
1,688,071	-				+2.1
1,688,071	-				+1.1
1,688,071	-				+0.1
1,688,071	-				+1.1
1,688,071	-				-0.9
1,688,071	-				+1.1
1,688,071	-				+0.1
1,688,118	+				+1.1
1,688,118	+				+0.2
1,688,118	+				-0.5
1,688,119	-				-0.9
1,688,119	-				+1.1
1,688,119	-				+1.1
1,688,155	-				+2.4
1,688,216	+				+1.1
1,689,128	+		ABIE53_001512	0.54	+0.1
1,689,129	-		ABIE53_001512	0.54	+0.1
1,689,129	-		ABIE53_001512	0.54	-4.0
1,689,129	-		ABIE53_001512	0.54	+0.1
1,689,129	-		ABIE53_001512	0.54	+1.1
1,689,291	+		ABIE53_001512	0.73	-1.4
1,689,292	-		ABIE53_001512	0.74	+1.1
1,689,374	+		ABIE53_001512	0.83	+1.1
1,689,375	-		ABIE53_001512	0.84	-0.5
1,689,375	-		ABIE53_001512	0.84	-2.1
1,689,622	-				+0.1