Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005774

Experiment: Laminarin 10 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Laminarin 10 g/L (C)
2,073,147	+		ABIE53_005773	0.36	-0.6
2,073,147	+		ABIE53_005773	0.36	+0.1
2,073,148	-		ABIE53_005773	0.37	+0.8
2,073,156	+		ABIE53_005773	0.37	-0.8
2,073,156	+		ABIE53_005773	0.37	+1.1
2,073,231	+		ABIE53_005773	0.43	+0.8
2,073,337	+		ABIE53_005773	0.50	+1.1
2,073,471	+		ABIE53_005773	0.60	-0.9
2,073,471	+		ABIE53_005773	0.60	-1.2
2,073,471	+		ABIE53_005773	0.60	+1.1
2,073,471	+		ABIE53_005773	0.60	-3.2
2,073,471	+		ABIE53_005773	0.60	+1.1
2,073,472	-		ABIE53_005773	0.60	-2.5
2,073,472	-		ABIE53_005773	0.60	+1.1
2,073,472	-		ABIE53_005773	0.60	-0.5
2,073,595	+		ABIE53_005773	0.69	+3.1
2,073,596	-		ABIE53_005773	0.70	-0.8
2,073,596	-		ABIE53_005773	0.70	-2.6
2,073,738	-		ABIE53_005773	0.80	+0.1
2,073,738	-		ABIE53_005773	0.80	+2.1
2,073,789	+		ABIE53_005773	0.84	+1.5
2,073,807	+		ABIE53_005773	0.85	-0.4
2,073,950	-				-1.2
2,073,950	-				+0.1
2,073,950	-				-1.2
2,073,950	-				-0.9
2,073,999	+				-1.7
2,074,052	+				+1.1
2,074,052	+				+1.1
2,074,119	-				-1.6
2,074,120	+				+3.1
2,074,344	+		ABIE53_005774	0.14	+2.1
2,074,379	+		ABIE53_005774	0.16	-2.2
2,074,397	+		ABIE53_005774	0.17	-1.4
2,074,421	+		ABIE53_005774	0.18	+1.1
2,074,534	-		ABIE53_005774	0.25	+1.1
2,074,618	-		ABIE53_005774	0.30	-0.5
2,074,645	-		ABIE53_005774	0.32	+1.1
2,074,796	+		ABIE53_005774	0.41	+1.1
2,074,806	-		ABIE53_005774	0.42	+1.1
2,074,934	+		ABIE53_005774	0.49	-1.2
2,075,081	-		ABIE53_005774	0.58	-1.5
2,075,081	-		ABIE53_005774	0.58	+1.1
2,075,094	-		ABIE53_005774	0.59	+0.1
2,075,120	+		ABIE53_005774	0.61	+2.1
2,075,199	+		ABIE53_005774	0.65	+1.1
2,075,199	+		ABIE53_005774	0.65	+0.1
2,075,200	-		ABIE53_005774	0.65	-0.6
2,075,200	-		ABIE53_005774	0.65	+1.1
2,075,200	-		ABIE53_005774	0.65	+1.1
2,075,201	+		ABIE53_005774	0.65	+0.1
2,075,202	-		ABIE53_005774	0.66	-2.2
2,075,289	-		ABIE53_005774	0.71	+2.1
2,075,372	+		ABIE53_005774	0.76	-1.9
2,075,414	+		ABIE53_005774	0.78	-1.9
2,075,414	+		ABIE53_005774	0.78	+1.1
2,075,415	-		ABIE53_005774	0.78	-0.6
2,075,739	+				+1.1
2,075,740	-				+1.1
2,075,777	+				+1.1
2,075,778	-				-0.2
2,075,792	+				+1.1
2,075,799	+				-1.3
2,075,799	+				+0.1
2,075,799	+				-0.4
2,075,799	+				+0.1
2,075,902	+				+0.1
2,076,019	+		ABIE53_005775	0.11	+1.6
2,076,019	+		ABIE53_005775	0.11	+0.7
2,076,019	+		ABIE53_005775	0.11	+0.1
2,076,019	+		ABIE53_005775	0.11	+0.7
2,076,020	-		ABIE53_005775	0.11	+0.6
2,076,020	-		ABIE53_005775	0.11	+1.7
2,076,281	+		ABIE53_005775	0.27	-0.7
2,076,281	+		ABIE53_005775	0.27	+1.6
2,076,282	-		ABIE53_005775	0.27	+0.3
2,076,282	-		ABIE53_005775	0.27	+0.5
2,076,416	+		ABIE53_005775	0.35	+1.1
2,076,417	-		ABIE53_005775	0.35	+1.1
2,076,747	+		ABIE53_005775	0.54	+0.5