Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4918

Experiment: KB with Harmol 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Harmol 10 mM
5,830,532	+				+0.1
5,830,532	+				+0.4
5,830,532	+				+0.7
5,830,533	-				-0.7
5,830,533	-				-0.3
5,830,533	-				-0.2
5,830,533	-				-1.9
5,830,533	-				+0.4
5,830,533	-				-0.2
5,830,812	+				-0.6
5,830,812	+				+0.3
5,830,814	+				-0.1
5,830,814	+				-1.6
5,830,814	+				+1.3
5,830,815	-				-0.6
5,830,815	-				+0.6
5,830,815	-				+0.1
5,830,858	-				+0.2
5,830,863	+				-1.1
5,830,912	-				+0.4
5,831,028	-				+0.4
5,831,033	+				+1.5
5,831,034	-				+0.7
5,831,034	-				+0.9
5,831,036	+				-2.0
5,831,037	-				-1.6
5,831,037	-				+0.1
5,831,067	+				-0.1
5,831,068	-				-1.1
5,831,068	-				+0.5
5,831,128	+				+0.7
5,831,129	-				+2.9
5,831,131	+				+2.8
5,831,131	+				+0.3
5,831,132	-				-1.7
5,831,146	+				+0.9
5,831,146	+				+0.3
5,831,149	+				-0.5
5,831,150	-				+0.3
5,831,150	-				-0.7
5,831,150	-				-0.1
5,831,153	+				-0.1
5,831,153	+				+0.2
5,831,153	+				+3.7
5,831,153	+				+0.3
5,831,153	+				-0.3
5,831,154	-				-0.4
5,831,162	+				-0.7
5,831,163	-				-0.1
5,831,195	-				+0.3
5,831,195	-				-0.1
5,831,206	+				+0.9
5,831,207	-				-0.9
5,831,207	-				-3.6
5,831,207	-				-0.1
5,831,208	+				-0.1
5,831,208	+				-0.6
5,831,208	+				+0.1
5,831,208	+				-1.1
5,831,208	+				+2.1
5,831,208	+				-0.2
5,831,209	-				+0.8
5,831,209	-				+0.4
5,831,209	-				+0.0
5,831,209	-				-0.9
5,831,209	-				-0.8
5,831,209	-				-0.1
5,831,209	-				-0.6
5,831,209	-				-2.6
5,831,209	-				+0.1
5,831,209	-				+0.3
5,831,209	-				-1.9
5,831,212	+				+0.4
5,831,213	-				-0.6
5,831,213	-				-0.3
5,831,213	-				-1.6
5,831,233	+				+1.1
5,831,233	+				-2.1
5,831,233	+				+0.9
5,831,233	+				-0.3
5,831,233	+				-2.2
5,831,234	-				-1.5
5,831,234	-				+2.9
5,831,234	-				-2.4
5,831,234	-				-0.2
5,831,235	+				-1.3
5,831,235	+				+1.6
5,831,235	+				+0.9
5,831,235	+				-1.1
5,831,235	+				+0.3
5,831,285	+				-1.1
5,831,285	+				-0.4
5,831,285	+				-1.3
5,831,285	+				-0.8
5,831,285	+				+0.7
5,831,286	-				-0.1
5,831,286	-				+1.4
5,831,286	-				-1.2
5,831,286	-				-0.7
5,831,289	+				-0.7
5,831,290	-				+1.8
5,831,290	-				+1.0
5,831,290	-				+1.0
5,831,290	-				-0.1
5,831,380	+				-0.7
5,831,381	-				+0.1
5,831,405	+				-0.5
5,831,405	+				-0.7
5,831,405	+				+1.3
5,831,405	+				-0.8
5,831,405	+				-1.6
5,831,405	+				-0.4
5,831,406	-				+1.9
5,831,406	-				-0.5
5,831,406	-				-0.6
5,831,406	-				+0.5
5,831,500	+		Psyr_4918	0.23	-1.0
5,831,500	+		Psyr_4918	0.23	-0.6
5,831,500	+		Psyr_4918	0.23	-1.7
5,831,500	+		Psyr_4918	0.23	-0.7
5,831,500	+		Psyr_4918	0.23	-0.7
5,831,500	+		Psyr_4918	0.23	-0.3
5,831,500	+		Psyr_4918	0.23	-0.7
5,831,501	-		Psyr_4918	0.23	+0.3
5,831,501	-		Psyr_4918	0.23	+1.6
5,831,501	-		Psyr_4918	0.23	-0.3
5,831,501	-		Psyr_4918	0.23	+0.3
5,831,501	-		Psyr_4918	0.23	+0.3
5,831,501	-		Psyr_4918	0.23	-0.8
5,831,501	-		Psyr_4918	0.23	-0.3
5,831,501	-		Psyr_4918	0.23	+0.6
5,831,501	-		Psyr_4918	0.23	-1.3
5,831,501	-		Psyr_4918	0.23	-0.9
5,831,622	-		Psyr_4918	0.49	+0.5
5,831,644	+		Psyr_4918	0.54	+0.6
5,831,644	+		Psyr_4918	0.54	+3.4
5,831,644	+		Psyr_4918	0.54	-0.4
5,831,644	+		Psyr_4918	0.54	+0.0
5,831,644	+		Psyr_4918	0.54	+0.4
5,831,645	-		Psyr_4918	0.54	-0.2
5,831,645	-		Psyr_4918	0.54	+0.7
5,831,645	-		Psyr_4918	0.54	-0.4
5,831,645	-		Psyr_4918	0.54	+0.0
5,831,645	-		Psyr_4918	0.54	-0.8
5,831,645	-		Psyr_4918	0.54	-1.2
5,831,645	-		Psyr_4918	0.54	+1.3
5,831,730	-		Psyr_4918	0.72	+1.3
5,831,817	-				-1.2
5,831,838	+				+1.5
5,831,838	+				-0.1
5,831,838	+				-0.7
5,831,839	-				+0.9
5,831,839	-				-0.1
5,831,839	-				+1.1
5,831,860	+				+0.7
5,831,860	+				+1.5
5,831,860	+				+0.2
5,831,869	-				-0.5
5,831,895	+				+0.6
5,831,895	+				+0.2
5,831,944	+				+1.5
5,831,944	+				-0.2
5,832,232	+				-0.6
5,832,232	+				+0.5
5,832,233	-				-0.1
5,832,233	-				-1.1
5,832,233	-				+0.2
5,832,233	-				-1.1
5,832,257	-				-1.7
5,832,267	+				-0.6
5,832,346	+				-1.8
5,832,346	+				+0.7
5,832,346	+				-0.1
5,832,346	+				+0.3
5,832,346	+				+1.2
5,832,346	+				+1.3
5,832,346	+				+0.2
5,832,347	-				-0.6
5,832,347	-				-0.7
5,832,347	-				+0.5
5,832,353	+				+1.4
5,832,353	+				-0.2
5,832,353	+				-0.9
5,832,353	+				+0.5
5,832,353	+				-0.3
5,832,354	-				+0.6
5,832,354	-				+1.3
5,832,354	-				-1.5
5,832,354	-				-0.3
5,832,354	-				+1.3
5,832,354	-				-0.8
5,832,359	+				+0.4
5,832,359	+				-0.1
5,832,359	+				-0.7
5,832,359	+				-1.1
5,832,359	+				+1.8
5,832,359	+				-0.9
5,832,359	+				-0.0
5,832,359	+				-0.1
5,832,359	+				-0.0
5,832,359	+				+0.0
5,832,359	+				+1.1
5,832,359	+				-3.3
5,832,359	+				-1.5
5,832,359	+				+0.2
5,832,360	-				+1.0
5,832,360	-				+0.3
5,832,360	-				+1.1
5,832,360	-				+0.8
5,832,360	-				-1.4
5,832,360	-				+0.8
5,832,360	-				+1.2
5,832,360	-				-1.1
5,832,360	-				+1.3
5,832,360	-				-0.1
5,832,360	-				-0.0
5,832,360	-				+2.3
5,832,360	-				+0.6
5,832,360	-				-0.2
5,832,360	-				-0.1
5,832,360	-				+0.0
5,832,360	-				-2.9
5,832,365	+				+0.3
5,832,365	+				+0.2
5,832,365	+				-0.6
5,832,366	-				+1.5
5,832,369	+				-1.2
5,832,369	+				-0.4
5,832,369	+				+2.0
5,832,370	-				+0.2
5,832,370	-				+1.7
5,832,441	-				+2.0
5,832,441	-				+0.9
5,832,498	+				-0.2
5,832,498	+				-0.3
5,832,498	+				-1.8
5,832,498	+				+0.5
5,832,499	-				-0.7
5,832,499	-				-0.7
5,832,499	-				-1.2
5,832,499	-				+2.7
5,832,499	-				-2.7
5,832,499	-				+0.0
5,832,549	+				-1.9
5,832,549	+				-0.4
5,832,675	+				+0.8
5,832,683	+				+0.4
5,832,703	+				-0.3
5,832,714	-				+0.2