Experiment: KB with Harmol 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4662 and Psyr_4663 are separated by 69 nucleotides Psyr_4663 and Psyr_4664 are separated by 76 nucleotides
Psyr_4662: Psyr_4662 - Amino acid adenylation, at 5,523,096 to 5,527,136
_4662
Psyr_4663: Psyr_4663 - hypothetical protein, at 5,527,206 to 5,527,613
_4663
Psyr_4664: Psyr_4664 - Filamentation induced by cAMP protein Fic, at 5,527,690 to 5,528,820
_4664
Position (kb) 5527
5528 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5526.318 kb on + strand, within Psyr_4662 at 5526.319 kb on - strand, within Psyr_4662 at 5526.433 kb on + strand, within Psyr_4662 at 5526.433 kb on + strand, within Psyr_4662 at 5526.434 kb on - strand, within Psyr_4662 at 5526.601 kb on + strand, within Psyr_4662 at 5526.601 kb on + strand, within Psyr_4662 at 5526.601 kb on + strand, within Psyr_4662 at 5526.601 kb on + strand, within Psyr_4662 at 5526.601 kb on + strand, within Psyr_4662 at 5526.601 kb on + strand, within Psyr_4662 at 5526.601 kb on + strand, within Psyr_4662 at 5526.602 kb on - strand, within Psyr_4662 at 5526.602 kb on - strand, within Psyr_4662 at 5526.602 kb on - strand, within Psyr_4662 at 5526.602 kb on - strand, within Psyr_4662 at 5526.602 kb on - strand, within Psyr_4662 at 5526.602 kb on - strand, within Psyr_4662 at 5526.602 kb on - strand, within Psyr_4662 at 5526.602 kb on - strand, within Psyr_4662 at 5526.602 kb on - strand, within Psyr_4662 at 5526.610 kb on + strand, within Psyr_4662 at 5526.610 kb on + strand, within Psyr_4662 at 5526.611 kb on - strand, within Psyr_4662 at 5526.611 kb on - strand, within Psyr_4662 at 5526.611 kb on - strand, within Psyr_4662 at 5526.611 kb on - strand, within Psyr_4662 at 5526.611 kb on - strand, within Psyr_4662 at 5526.961 kb on + strand at 5527.070 kb on + strand at 5527.070 kb on + strand at 5527.078 kb on + strand at 5527.078 kb on + strand at 5527.078 kb on + strand at 5527.078 kb on + strand at 5527.079 kb on - strand at 5527.079 kb on - strand at 5527.079 kb on - strand at 5527.079 kb on - strand at 5527.111 kb on - strand at 5527.146 kb on + strand at 5527.146 kb on + strand at 5527.146 kb on + strand at 5527.147 kb on - strand at 5527.147 kb on - strand at 5527.147 kb on - strand at 5527.147 kb on - strand at 5527.149 kb on + strand at 5527.149 kb on + strand at 5527.149 kb on + strand at 5527.149 kb on + strand at 5527.149 kb on + strand at 5527.149 kb on + strand at 5527.149 kb on + strand at 5527.149 kb on + strand at 5527.150 kb on - strand at 5527.150 kb on - strand at 5527.150 kb on - strand at 5527.150 kb on - strand at 5527.150 kb on - strand at 5527.231 kb on + strand at 5527.232 kb on - strand at 5527.232 kb on - strand at 5527.242 kb on + strand at 5527.242 kb on + strand at 5527.242 kb on + strand at 5527.242 kb on + strand at 5527.242 kb on + strand at 5527.244 kb on + strand at 5527.244 kb on + strand at 5527.244 kb on + strand at 5527.244 kb on + strand at 5527.244 kb on + strand at 5527.244 kb on + strand at 5527.245 kb on - strand at 5527.245 kb on - strand at 5527.245 kb on - strand at 5527.245 kb on - strand at 5527.245 kb on - strand at 5527.245 kb on - strand at 5527.245 kb on - strand at 5527.245 kb on - strand at 5527.245 kb on - strand at 5527.258 kb on + strand, within Psyr_4663 at 5527.258 kb on + strand, within Psyr_4663 at 5527.259 kb on - strand, within Psyr_4663 at 5527.391 kb on + strand, within Psyr_4663 at 5527.392 kb on - strand, within Psyr_4663 at 5527.449 kb on + strand, within Psyr_4663 at 5527.449 kb on + strand, within Psyr_4663 at 5527.449 kb on + strand, within Psyr_4663 at 5527.449 kb on + strand, within Psyr_4663 at 5527.449 kb on + strand, within Psyr_4663 at 5527.449 kb on + strand, within Psyr_4663 at 5527.449 kb on + strand, within Psyr_4663 at 5527.449 kb on + strand, within Psyr_4663 at 5527.450 kb on - strand, within Psyr_4663 at 5527.450 kb on - strand, within Psyr_4663 at 5527.450 kb on - strand, within Psyr_4663 at 5527.450 kb on - strand, within Psyr_4663 at 5527.451 kb on + strand, within Psyr_4663 at 5527.452 kb on - strand, within Psyr_4663 at 5527.576 kb on + strand at 5527.576 kb on + strand at 5527.576 kb on + strand at 5527.576 kb on + strand at 5527.577 kb on - strand at 5527.577 kb on - strand at 5527.577 kb on - strand at 5527.620 kb on + strand at 5527.654 kb on + strand at 5527.678 kb on + strand at 5527.769 kb on + strand at 5527.770 kb on - strand at 5527.870 kb on - strand, within Psyr_4664 at 5527.968 kb on + strand, within Psyr_4664 at 5527.968 kb on + strand, within Psyr_4664 at 5527.968 kb on + strand, within Psyr_4664 at 5527.968 kb on + strand, within Psyr_4664 at 5527.969 kb on - strand, within Psyr_4664 at 5527.969 kb on - strand, within Psyr_4664 at 5527.969 kb on - strand, within Psyr_4664 at 5528.052 kb on + strand, within Psyr_4664 at 5528.052 kb on + strand, within Psyr_4664 at 5528.052 kb on + strand, within Psyr_4664 at 5528.052 kb on + strand, within Psyr_4664 at 5528.053 kb on - strand, within Psyr_4664 at 5528.136 kb on + strand, within Psyr_4664 at 5528.136 kb on + strand, within Psyr_4664 at 5528.136 kb on + strand, within Psyr_4664 at 5528.136 kb on + strand, within Psyr_4664 at 5528.136 kb on + strand, within Psyr_4664 at 5528.136 kb on + strand, within Psyr_4664 at 5528.136 kb on + strand, within Psyr_4664 at 5528.136 kb on + strand, within Psyr_4664 at 5528.136 kb on + strand, within Psyr_4664 at 5528.136 kb on + strand, within Psyr_4664 at 5528.136 kb on + strand, within Psyr_4664 at 5528.136 kb on + strand, within Psyr_4664 at 5528.137 kb on - strand, within Psyr_4664 at 5528.287 kb on - strand, within Psyr_4664 at 5528.306 kb on + strand, within Psyr_4664 at 5528.307 kb on - strand, within Psyr_4664 at 5528.393 kb on + strand, within Psyr_4664 at 5528.394 kb on - strand, within Psyr_4664 at 5528.443 kb on + strand, within Psyr_4664 at 5528.443 kb on + strand, within Psyr_4664 at 5528.444 kb on - strand, within Psyr_4664 at 5528.444 kb on - strand, within Psyr_4664 at 5528.444 kb on - strand, within Psyr_4664 at 5528.547 kb on + strand, within Psyr_4664 at 5528.548 kb on - strand, within Psyr_4664 at 5528.549 kb on + strand, within Psyr_4664 at 5528.549 kb on + strand, within Psyr_4664 at 5528.549 kb on + strand, within Psyr_4664 at 5528.549 kb on + strand, within Psyr_4664 at 5528.549 kb on + strand, within Psyr_4664 at 5528.549 kb on + strand, within Psyr_4664 at 5528.549 kb on + strand, within Psyr_4664 at 5528.549 kb on + strand, within Psyr_4664 at 5528.549 kb on + strand, within Psyr_4664 at 5528.550 kb on - strand, within Psyr_4664 at 5528.550 kb on - strand, within Psyr_4664 at 5528.550 kb on - strand, within Psyr_4664 at 5528.550 kb on - strand, within Psyr_4664 at 5528.550 kb on - strand, within Psyr_4664 at 5528.550 kb on - strand, within Psyr_4664 at 5528.550 kb on - strand, within Psyr_4664 at 5528.585 kb on + strand, within Psyr_4664 at 5528.585 kb on + strand, within Psyr_4664 at 5528.585 kb on + strand, within Psyr_4664 at 5528.585 kb on + strand, within Psyr_4664 at 5528.585 kb on + strand, within Psyr_4664 at 5528.585 kb on + strand, within Psyr_4664 at 5528.585 kb on + strand, within Psyr_4664 at 5528.585 kb on + strand, within Psyr_4664 at 5528.585 kb on + strand, within Psyr_4664 at 5528.586 kb on - strand, within Psyr_4664 at 5528.586 kb on - strand, within Psyr_4664 at 5528.586 kb on - strand, within Psyr_4664 at 5528.586 kb on - strand, within Psyr_4664 at 5528.586 kb on - strand, within Psyr_4664 at 5528.586 kb on - strand, within Psyr_4664 at 5528.586 kb on - strand, within Psyr_4664 at 5528.586 kb on - strand, within Psyr_4664
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Harmol 10 mM remove 5,526,318 + Psyr_4662 0.80 -0.4 5,526,319 - Psyr_4662 0.80 +0.2 5,526,433 + Psyr_4662 0.83 +0.5 5,526,433 + Psyr_4662 0.83 +0.3 5,526,434 - Psyr_4662 0.83 +0.7 5,526,601 + Psyr_4662 0.87 -0.3 5,526,601 + Psyr_4662 0.87 -0.1 5,526,601 + Psyr_4662 0.87 +1.4 5,526,601 + Psyr_4662 0.87 +0.3 5,526,601 + Psyr_4662 0.87 +0.2 5,526,601 + Psyr_4662 0.87 +0.6 5,526,601 + Psyr_4662 0.87 +0.8 5,526,602 - Psyr_4662 0.87 +0.2 5,526,602 - Psyr_4662 0.87 +0.1 5,526,602 - Psyr_4662 0.87 -0.4 5,526,602 - Psyr_4662 0.87 +0.8 5,526,602 - Psyr_4662 0.87 -0.2 5,526,602 - Psyr_4662 0.87 +1.5 5,526,602 - Psyr_4662 0.87 -0.9 5,526,602 - Psyr_4662 0.87 -1.6 5,526,602 - Psyr_4662 0.87 -0.8 5,526,610 + Psyr_4662 0.87 +1.1 5,526,610 + Psyr_4662 0.87 +0.3 5,526,611 - Psyr_4662 0.87 -0.8 5,526,611 - Psyr_4662 0.87 -0.7 5,526,611 - Psyr_4662 0.87 -0.4 5,526,611 - Psyr_4662 0.87 +0.4 5,526,611 - Psyr_4662 0.87 -0.5 5,526,961 + -0.7 5,527,070 + +0.2 5,527,070 + -0.3 5,527,078 + -1.1 5,527,078 + +1.5 5,527,078 + -1.1 5,527,078 + -2.5 5,527,079 - -1.7 5,527,079 - -0.8 5,527,079 - -0.2 5,527,079 - -0.1 5,527,111 - +0.5 5,527,146 + -0.4 5,527,146 + -0.3 5,527,146 + -0.2 5,527,147 - -1.0 5,527,147 - +0.3 5,527,147 - -2.2 5,527,147 - +1.9 5,527,149 + -0.7 5,527,149 + -0.0 5,527,149 + -0.3 5,527,149 + +0.1 5,527,149 + -0.8 5,527,149 + -1.9 5,527,149 + -0.9 5,527,149 + +0.2 5,527,150 - -1.6 5,527,150 - -0.4 5,527,150 - +0.4 5,527,150 - +1.2 5,527,150 - +3.5 5,527,231 + +0.0 5,527,232 - -0.6 5,527,232 - -1.3 5,527,242 + +0.3 5,527,242 + +0.4 5,527,242 + +1.7 5,527,242 + -0.0 5,527,242 + -0.3 5,527,244 + -2.0 5,527,244 + -0.6 5,527,244 + -0.4 5,527,244 + -0.1 5,527,244 + -1.6 5,527,244 + +0.3 5,527,245 - +2.8 5,527,245 - -0.0 5,527,245 - -0.2 5,527,245 - +1.9 5,527,245 - -0.6 5,527,245 - -0.1 5,527,245 - -0.0 5,527,245 - -0.6 5,527,245 - -0.1 5,527,258 + Psyr_4663 0.13 +1.3 5,527,258 + Psyr_4663 0.13 +0.6 5,527,259 - Psyr_4663 0.13 +0.3 5,527,391 + Psyr_4663 0.45 -0.6 5,527,392 - Psyr_4663 0.46 -1.3 5,527,449 + Psyr_4663 0.60 -1.0 5,527,449 + Psyr_4663 0.60 +1.5 5,527,449 + Psyr_4663 0.60 -1.1 5,527,449 + Psyr_4663 0.60 +0.8 5,527,449 + Psyr_4663 0.60 +0.2 5,527,449 + Psyr_4663 0.60 +0.8 5,527,449 + Psyr_4663 0.60 +0.6 5,527,449 + Psyr_4663 0.60 -1.0 5,527,450 - Psyr_4663 0.60 -0.5 5,527,450 - Psyr_4663 0.60 +0.6 5,527,450 - Psyr_4663 0.60 +1.2 5,527,450 - Psyr_4663 0.60 +1.8 5,527,451 + Psyr_4663 0.60 -0.1 5,527,452 - Psyr_4663 0.60 +1.5 5,527,576 + +0.0 5,527,576 + +0.3 5,527,576 + +0.1 5,527,576 + +0.1 5,527,577 - -0.4 5,527,577 - -1.4 5,527,577 - +0.7 5,527,620 + -0.2 5,527,654 + -0.3 5,527,678 + -0.8 5,527,769 + -0.7 5,527,770 - -1.1 5,527,870 - Psyr_4664 0.16 -0.7 5,527,968 + Psyr_4664 0.25 +1.6 5,527,968 + Psyr_4664 0.25 -1.0 5,527,968 + Psyr_4664 0.25 -0.1 5,527,968 + Psyr_4664 0.25 +0.2 5,527,969 - Psyr_4664 0.25 -1.6 5,527,969 - Psyr_4664 0.25 -0.5 5,527,969 - Psyr_4664 0.25 -1.9 5,528,052 + Psyr_4664 0.32 +1.6 5,528,052 + Psyr_4664 0.32 +0.3 5,528,052 + Psyr_4664 0.32 -0.3 5,528,052 + Psyr_4664 0.32 -0.8 5,528,053 - Psyr_4664 0.32 -0.1 5,528,136 + Psyr_4664 0.39 +1.0 5,528,136 + Psyr_4664 0.39 +1.2 5,528,136 + Psyr_4664 0.39 +2.2 5,528,136 + Psyr_4664 0.39 -0.3 5,528,136 + Psyr_4664 0.39 -0.5 5,528,136 + Psyr_4664 0.39 +0.3 5,528,136 + Psyr_4664 0.39 +0.8 5,528,136 + Psyr_4664 0.39 -0.4 5,528,136 + Psyr_4664 0.39 -0.6 5,528,136 + Psyr_4664 0.39 -0.8 5,528,136 + Psyr_4664 0.39 -0.6 5,528,136 + Psyr_4664 0.39 +0.3 5,528,137 - Psyr_4664 0.40 +1.2 5,528,287 - Psyr_4664 0.53 +0.5 5,528,306 + Psyr_4664 0.54 +0.2 5,528,307 - Psyr_4664 0.55 -0.5 5,528,393 + Psyr_4664 0.62 +0.8 5,528,394 - Psyr_4664 0.62 +1.7 5,528,443 + Psyr_4664 0.67 +0.8 5,528,443 + Psyr_4664 0.67 -1.2 5,528,444 - Psyr_4664 0.67 -1.4 5,528,444 - Psyr_4664 0.67 -0.1 5,528,444 - Psyr_4664 0.67 -0.8 5,528,547 + Psyr_4664 0.76 -1.4 5,528,548 - Psyr_4664 0.76 +1.4 5,528,549 + Psyr_4664 0.76 +0.2 5,528,549 + Psyr_4664 0.76 -1.1 5,528,549 + Psyr_4664 0.76 +0.7 5,528,549 + Psyr_4664 0.76 -0.1 5,528,549 + Psyr_4664 0.76 +1.2 5,528,549 + Psyr_4664 0.76 +2.3 5,528,549 + Psyr_4664 0.76 -0.2 5,528,549 + Psyr_4664 0.76 -0.6 5,528,549 + Psyr_4664 0.76 -0.4 5,528,550 - Psyr_4664 0.76 +0.6 5,528,550 - Psyr_4664 0.76 +1.0 5,528,550 - Psyr_4664 0.76 +1.4 5,528,550 - Psyr_4664 0.76 -0.3 5,528,550 - Psyr_4664 0.76 +0.2 5,528,550 - Psyr_4664 0.76 +0.5 5,528,550 - Psyr_4664 0.76 -1.8 5,528,585 + Psyr_4664 0.79 +0.1 5,528,585 + Psyr_4664 0.79 +0.3 5,528,585 + Psyr_4664 0.79 -1.4 5,528,585 + Psyr_4664 0.79 -0.1 5,528,585 + Psyr_4664 0.79 +0.6 5,528,585 + Psyr_4664 0.79 +0.2 5,528,585 + Psyr_4664 0.79 -0.6 5,528,585 + Psyr_4664 0.79 -0.8 5,528,585 + Psyr_4664 0.79 -1.6 5,528,586 - Psyr_4664 0.79 +0.4 5,528,586 - Psyr_4664 0.79 -0.2 5,528,586 - Psyr_4664 0.79 +1.5 5,528,586 - Psyr_4664 0.79 +0.6 5,528,586 - Psyr_4664 0.79 +0.1 5,528,586 - Psyr_4664 0.79 +2.8 5,528,586 - Psyr_4664 0.79 -0.8 5,528,586 - Psyr_4664 0.79 -1.1
Or see this region's nucleotide sequence