Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1890

Experiment: KB with Harmol 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Harmol 10 mM
2,159,607	-				-0.1
2,159,623	+				-0.5
2,159,623	+				-0.4
2,159,624	-				+0.4
2,159,626	-				-0.1
2,159,712	-				+0.3
2,159,712	-				-1.3
2,159,738	+				-0.6
2,159,738	+				+0.6
2,159,738	+				+0.7
2,159,738	+				-0.3
2,159,738	+				-2.0
2,159,738	+				-0.4
2,159,738	+				+1.2
2,159,738	+				+0.9
2,159,738	+				-0.0
2,159,739	-				+1.4
2,159,739	-				-0.7
2,159,739	-				-0.7
2,159,739	-				-0.6
2,159,739	-				-1.0
2,159,739	-				-0.7
2,159,739	-				+0.4
2,159,739	-				-0.4
2,159,739	-				-0.3
2,159,739	-				-0.9
2,159,744	+				-1.0
2,159,744	+				-2.0
2,159,744	+				-1.3
2,159,744	+				-0.7
2,159,744	+				+0.1
2,159,745	-				-0.8
2,159,745	-				-0.1
2,159,745	-				+0.3
2,159,751	+				-0.4
2,159,752	-				+0.7
2,159,752	-				+0.3
2,159,752	-				+0.5
2,159,755	+				+0.6
2,159,755	+				+0.3
2,159,755	+				-0.7
2,159,755	+				-1.9
2,159,755	+				-0.8
2,159,755	+				+1.7
2,159,756	-				+0.5
2,159,756	-				+0.4
2,159,756	-				+0.3
2,159,799	+				+0.4
2,159,800	-				+0.7
2,159,800	-				+0.6
2,159,812	+				-0.3
2,159,812	+				-0.8
2,159,812	+				-0.1
2,159,813	-				-0.7
2,159,813	-				-0.4
2,159,813	-				+0.0
2,159,813	-				+0.1
2,159,813	-				-1.5
2,159,813	-				+0.7
2,159,813	-				-1.3
2,159,853	+				-0.7
2,159,853	+				-0.1
2,159,854	-				-1.0
2,159,854	-				-1.0
2,159,904	+				+0.7
2,159,918	-				-2.0
2,159,918	-				-0.1
2,159,918	-				+1.4
2,159,918	-				+1.2
2,159,927	+				-0.6
2,159,927	+				+0.2
2,159,928	-				+0.0
2,159,980	-				-0.1
2,159,980	-				+0.9
2,159,980	-				+0.1
2,160,010	+				-0.6
2,160,106	-				+1.1
2,160,131	+				-0.5
2,160,131	+				+1.3
2,160,132	-				+0.1
2,160,132	-				+0.3
2,160,193	+				+0.9
2,160,193	+				+0.8
2,160,194	-				+0.1
2,160,212	-				+0.6
2,160,212	-				+1.6
2,160,212	-				+2.1
2,160,216	+				-1.8
2,160,216	+				+1.9
2,160,217	-				-0.3
2,160,217	-				-0.9
2,160,217	-				-0.5
2,160,338	+				-0.4
2,160,338	+				-0.7
2,160,339	-				+0.4
2,160,444	+				-0.7
2,160,444	+				-0.1
2,160,444	+				+1.1
2,160,444	+				-1.3
2,160,444	+				+0.1
2,160,445	-				-1.2
2,160,494	-				+0.5
2,160,508	+				-0.5
2,160,508	+				-1.7
2,160,508	+				+2.4
2,160,508	+				+0.5
2,160,509	-				-0.7
2,160,553	+				-1.5
2,160,554	-				+1.3
2,160,554	-				+1.9
2,160,554	-				+0.9
2,160,585	+				-0.3
2,160,585	+				+0.6
2,160,585	+				+1.6
2,160,585	+				+0.9
2,160,585	+				-2.1
2,160,585	+				-0.1
2,160,585	+				-0.2
2,160,585	+				-1.3
2,160,585	+				-0.6
2,160,586	-				+0.3
2,160,586	-				-0.4
2,160,586	-				+0.2
2,160,586	-				+2.9
2,160,586	-				-1.7
2,160,589	+				+0.3
2,160,589	+				-0.4
2,160,589	+				-0.4
2,160,589	+				-0.7
2,160,589	+				-0.1
2,160,590	-				-0.5
2,160,590	-				-0.1
2,160,590	-				+0.3
2,160,590	-				+0.4
2,160,590	-				-0.6
2,160,590	-				+0.6
2,160,590	-				-0.7
2,160,634	+				+0.4
2,160,634	+				+1.9
2,160,636	+				-0.1
2,160,637	-				+2.2
2,160,680	-		Psyr_1890	0.16	+0.2
2,160,690	+		Psyr_1890	0.18	-1.8
2,160,691	-		Psyr_1890	0.18	-1.6
2,160,725	+		Psyr_1890	0.24	+0.0
2,160,725	+		Psyr_1890	0.24	+1.2
2,160,725	+		Psyr_1890	0.24	+0.4
2,160,726	-		Psyr_1890	0.24	+0.5
2,160,726	-		Psyr_1890	0.24	+0.3
2,160,726	-		Psyr_1890	0.24	-1.3
2,160,744	+		Psyr_1890	0.27	-0.5
2,160,847	+		Psyr_1890	0.44	-1.0
2,160,854	+		Psyr_1890	0.45	-1.0
2,160,874	+		Psyr_1890	0.49	-0.4
2,160,874	+		Psyr_1890	0.49	-0.3
2,160,874	+		Psyr_1890	0.49	-0.3
2,160,874	+		Psyr_1890	0.49	+0.4
2,160,875	-		Psyr_1890	0.49	-0.5
2,160,875	-		Psyr_1890	0.49	+0.2
2,160,875	-		Psyr_1890	0.49	-1.0
2,160,875	-		Psyr_1890	0.49	-1.7
2,160,897	+		Psyr_1890	0.52	-0.8
2,160,898	-		Psyr_1890	0.53	+1.9
2,160,898	-		Psyr_1890	0.53	-0.3
2,160,950	-		Psyr_1890	0.61	-1.6
2,160,959	-		Psyr_1890	0.63	-2.3
2,160,964	+		Psyr_1890	0.64	-1.9
2,160,964	+		Psyr_1890	0.64	+1.0
2,160,964	+		Psyr_1890	0.64	+0.4
2,160,964	+		Psyr_1890	0.64	+0.9
2,160,964	+		Psyr_1890	0.64	+0.4
2,160,964	+		Psyr_1890	0.64	-0.9
2,160,964	+		Psyr_1890	0.64	+0.4
2,160,964	+		Psyr_1890	0.64	+2.4
2,160,964	+		Psyr_1890	0.64	+0.2
2,160,965	-		Psyr_1890	0.64	-0.7
2,160,965	-		Psyr_1890	0.64	-1.5
2,160,965	-		Psyr_1890	0.64	+0.2
2,160,965	-		Psyr_1890	0.64	+2.4
2,160,965	-		Psyr_1890	0.64	+1.1
2,160,965	-		Psyr_1890	0.64	-0.3
2,160,965	-		Psyr_1890	0.64	-1.9
2,160,965	-		Psyr_1890	0.64	-1.9
2,160,965	-		Psyr_1890	0.64	-2.3
2,160,965	-		Psyr_1890	0.64	-0.6
2,160,965	-		Psyr_1890	0.64	-2.0
2,160,965	-		Psyr_1890	0.64	-0.5
2,160,965	-		Psyr_1890	0.64	-0.3
2,160,966	+		Psyr_1890	0.64	+0.1
2,160,967	-		Psyr_1890	0.64	-0.5
2,160,967	-		Psyr_1890	0.64	-0.8
2,160,998	+		Psyr_1890	0.69	+0.1
2,160,998	+		Psyr_1890	0.69	-0.6
2,161,007	+		Psyr_1890	0.71	+1.1
2,161,008	-		Psyr_1890	0.71	+1.9
2,161,165	+				+1.1
2,161,229	+				+1.4
2,161,229	+				+2.4
2,161,229	+				+0.7
2,161,229	+				-0.9
2,161,229	+				+1.7
2,161,229	+				+0.9
2,161,230	-				-0.7
2,161,230	-				+0.2
2,161,230	-				-1.4
2,161,230	-				-0.6
2,161,230	-				+0.5
2,161,230	-				+0.9
2,161,240	-				+1.9
2,161,290	+				-1.4
2,161,290	+				+0.3
2,161,291	-				-0.2
2,161,291	-				-0.1
2,161,291	-				+0.1
2,161,316	+				+0.2
2,161,317	-				-0.9
2,161,317	-				+0.5
2,161,317	-				+1.4
2,161,317	-				+0.6
2,161,350	+				-2.1
2,161,350	+				-0.4
2,161,350	+				-0.6
2,161,351	-				+1.6
2,161,351	-				-0.5
2,161,361	+				+0.5
2,161,361	+				+0.2
2,161,361	+				+0.0
2,161,361	+				-0.9
2,161,361	+				+0.3
2,161,361	+				-1.4
2,161,361	+				+0.2
2,161,362	-				+1.0
2,161,362	-				-1.9
2,161,362	-				+0.2
2,161,362	-				-0.9
2,161,362	-				+0.3
2,161,366	-				-0.7
2,161,366	-				+0.7
2,161,366	-				+0.5
2,161,512	+		Psyr_1891	0.37	-0.6
2,161,512	+		Psyr_1891	0.37	+0.6
2,161,512	+		Psyr_1891	0.37	+0.1
2,161,512	+		Psyr_1891	0.37	-0.4
2,161,513	-		Psyr_1891	0.38	-1.6
2,161,602	+		Psyr_1891	0.67	+0.2
2,161,606	-		Psyr_1891	0.68	-0.8
2,161,606	-		Psyr_1891	0.68	+0.4
2,161,612	+		Psyr_1891	0.70	+0.1
2,161,612	+		Psyr_1891	0.70	+0.9
2,161,613	-		Psyr_1891	0.71	-1.2
2,161,613	-		Psyr_1891	0.71	-0.3
2,161,655	-		Psyr_1891	0.84	-0.6
2,161,760	+				-0.4
2,161,760	+				-1.0
2,161,760	+				-0.6
2,161,760	+				-0.7
2,161,760	+				-0.7
2,161,761	-				-0.6
2,161,761	-				+0.4
2,161,761	-				-1.1
2,161,805	+				-0.6
2,161,899	+				-0.5