Experiment: MoLS4 with L-Valine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0729 and DVU0730 are separated by 389 nucleotides DVU0730 and DVU0731 are separated by 4 nucleotides
DVU0729: DVU0729 - hypothetical protein (TIGR), at 813,205 to 813,660
DVU0729
DVU0730: DVU0730 - conserved hypothetical protein (TIGR), at 814,050 to 815,015
DVU0730
DVU0731: DVU0731 - hypothetical protein (TIGR), at 815,020 to 816,381
DVU0731
Position (kb) 814
815
816 Strain fitness (log2 ratio) -1
0
1 at 813.114 kb on + strand at 813.122 kb on - strand at 813.211 kb on - strand at 813.226 kb on - strand at 813.239 kb on - strand at 813.257 kb on - strand, within DVU0729 at 813.299 kb on - strand, within DVU0729 at 813.327 kb on + strand, within DVU0729 at 813.337 kb on + strand, within DVU0729 at 813.577 kb on + strand, within DVU0729 at 813.577 kb on + strand, within DVU0729 at 813.591 kb on + strand, within DVU0729 at 813.648 kb on + strand at 813.685 kb on + strand at 813.708 kb on + strand at 813.742 kb on - strand at 813.773 kb on - strand at 813.825 kb on + strand at 813.992 kb on + strand at 814.005 kb on - strand at 814.047 kb on + strand at 814.057 kb on - strand at 814.094 kb on - strand at 814.247 kb on + strand, within DVU0730 at 814.268 kb on + strand, within DVU0730 at 814.308 kb on + strand, within DVU0730 at 814.472 kb on + strand, within DVU0730 at 814.525 kb on + strand, within DVU0730 at 814.729 kb on + strand, within DVU0730 at 814.770 kb on - strand, within DVU0730 at 814.798 kb on + strand, within DVU0730 at 814.806 kb on - strand, within DVU0730 at 814.888 kb on - strand, within DVU0730 at 814.908 kb on + strand, within DVU0730 at 814.940 kb on + strand at 814.944 kb on + strand at 814.967 kb on + strand at 815.016 kb on + strand at 815.049 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Valine as nutrient 10mM remove 813,114 + +0.2 813,122 - +1.3 813,211 - +0.0 813,226 - -1.5 813,239 - -0.1 813,257 - DVU0729 0.11 -0.2 813,299 - DVU0729 0.21 +0.0 813,327 + DVU0729 0.27 -0.3 813,337 + DVU0729 0.29 +0.3 813,577 + DVU0729 0.82 +0.2 813,577 + DVU0729 0.82 -0.6 813,591 + DVU0729 0.85 -0.0 813,648 + +0.3 813,685 + -1.5 813,708 + -0.4 813,742 - +0.1 813,773 - +0.1 813,825 + -0.0 813,992 + -1.0 814,005 - -0.2 814,047 + -0.5 814,057 - +0.1 814,094 - -0.0 814,247 + DVU0730 0.20 -1.6 814,268 + DVU0730 0.23 -0.3 814,308 + DVU0730 0.27 -0.1 814,472 + DVU0730 0.44 +1.0 814,525 + DVU0730 0.49 +0.1 814,729 + DVU0730 0.70 -0.4 814,770 - DVU0730 0.75 -0.0 814,798 + DVU0730 0.77 -0.2 814,806 - DVU0730 0.78 -0.9 814,888 - DVU0730 0.87 -1.6 814,908 + DVU0730 0.89 -1.7 814,940 + +0.7 814,944 + -0.1 814,967 + -0.4 815,016 + -1.3 815,049 + +0.3
Or see this region's nucleotide sequence