Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4757 and Psyr_4758 are separated by 368 nucleotides Psyr_4758 and Psyr_4759 are separated by 98 nucleotides Psyr_4759 and Psyr_4760 are separated by 9 nucleotides Psyr_4760 and Psyr_4761 are separated by 97 nucleotides
Psyr_4757: Psyr_4757 - transcriptional regulator, TetR family, at 5,633,856 to 5,634,518
_4757
Psyr_4758: Psyr_4758 - Phosphopantetheine adenylyltransferase, at 5,634,887 to 5,635,366
_4758
Psyr_4759: Psyr_4759 - 4Fe-4S ferredoxin, iron-sulfur binding protein, at 5,635,465 to 5,635,716
_4759
Psyr_4760: Psyr_4760 - conserved hypothetical protein, at 5,635,726 to 5,636,064
_4760
Psyr_4761: Psyr_4761 - DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase, at 5,636,162 to 5,636,974
_4761
Position (kb) 5634
5635
5636 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5633.951 kb on + strand, within Psyr_4757 at 5633.951 kb on + strand, within Psyr_4757 at 5633.951 kb on + strand, within Psyr_4757 at 5633.951 kb on + strand, within Psyr_4757 at 5633.951 kb on + strand, within Psyr_4757 at 5633.951 kb on + strand, within Psyr_4757 at 5633.951 kb on + strand, within Psyr_4757 at 5633.951 kb on + strand, within Psyr_4757 at 5633.951 kb on + strand, within Psyr_4757 at 5633.951 kb on + strand, within Psyr_4757 at 5633.951 kb on + strand, within Psyr_4757 at 5633.951 kb on + strand, within Psyr_4757 at 5633.951 kb on + strand, within Psyr_4757 at 5633.952 kb on - strand, within Psyr_4757 at 5633.952 kb on - strand, within Psyr_4757 at 5633.952 kb on - strand, within Psyr_4757 at 5633.952 kb on - strand, within Psyr_4757 at 5633.952 kb on - strand, within Psyr_4757 at 5633.952 kb on - strand, within Psyr_4757 at 5633.952 kb on - strand, within Psyr_4757 at 5633.952 kb on - strand, within Psyr_4757 at 5633.952 kb on - strand, within Psyr_4757 at 5633.952 kb on - strand, within Psyr_4757 at 5633.955 kb on + strand, within Psyr_4757 at 5633.955 kb on + strand, within Psyr_4757 at 5633.955 kb on + strand, within Psyr_4757 at 5633.955 kb on + strand, within Psyr_4757 at 5633.955 kb on + strand, within Psyr_4757 at 5633.955 kb on + strand, within Psyr_4757 at 5633.955 kb on + strand, within Psyr_4757 at 5633.956 kb on - strand, within Psyr_4757 at 5633.956 kb on - strand, within Psyr_4757 at 5633.962 kb on + strand, within Psyr_4757 at 5633.962 kb on + strand, within Psyr_4757 at 5633.962 kb on + strand, within Psyr_4757 at 5634.124 kb on + strand, within Psyr_4757 at 5634.125 kb on - strand, within Psyr_4757 at 5634.265 kb on + strand, within Psyr_4757 at 5634.265 kb on + strand, within Psyr_4757 at 5634.266 kb on - strand, within Psyr_4757 at 5634.385 kb on + strand, within Psyr_4757 at 5634.389 kb on - strand, within Psyr_4757 at 5634.389 kb on - strand, within Psyr_4757 at 5634.389 kb on - strand, within Psyr_4757 at 5634.389 kb on - strand, within Psyr_4757 at 5634.413 kb on + strand, within Psyr_4757 at 5634.443 kb on + strand, within Psyr_4757 at 5634.536 kb on + strand at 5634.536 kb on + strand at 5634.536 kb on + strand at 5634.536 kb on + strand at 5634.536 kb on + strand at 5634.536 kb on + strand at 5634.536 kb on + strand at 5634.537 kb on - strand at 5634.537 kb on - strand at 5634.537 kb on - strand at 5634.537 kb on - strand at 5634.537 kb on - strand at 5634.537 kb on - strand at 5634.537 kb on - strand at 5634.537 kb on - strand at 5634.537 kb on - strand at 5634.537 kb on - strand at 5634.537 kb on - strand at 5634.537 kb on - strand at 5634.611 kb on + strand at 5634.611 kb on + strand at 5634.611 kb on + strand at 5634.611 kb on + strand at 5634.611 kb on + strand at 5634.612 kb on - strand at 5634.612 kb on - strand at 5634.612 kb on - strand at 5634.612 kb on - strand at 5634.612 kb on - strand at 5634.612 kb on - strand at 5634.700 kb on - strand at 5634.714 kb on - strand at 5634.714 kb on - strand at 5634.744 kb on + strand at 5634.796 kb on - strand at 5635.365 kb on - strand at 5635.428 kb on + strand at 5635.727 kb on + strand at 5635.728 kb on - strand at 5635.958 kb on + strand, within Psyr_4760 at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.091 kb on - strand at 5636.091 kb on - strand at 5636.091 kb on - strand at 5636.091 kb on - strand at 5636.091 kb on - strand at 5636.094 kb on + strand at 5636.094 kb on + strand at 5636.094 kb on + strand at 5636.095 kb on - strand at 5636.108 kb on + strand at 5636.108 kb on + strand at 5636.108 kb on + strand at 5636.108 kb on + strand at 5636.109 kb on - strand at 5636.109 kb on - strand at 5636.109 kb on - strand at 5636.110 kb on + strand at 5636.110 kb on + strand at 5636.110 kb on + strand at 5636.110 kb on + strand at 5636.111 kb on - strand at 5636.111 kb on - strand at 5636.111 kb on - strand at 5636.111 kb on - strand at 5636.111 kb on - strand at 5636.111 kb on - strand at 5636.128 kb on - strand at 5636.158 kb on + strand at 5636.158 kb on + strand at 5636.158 kb on + strand at 5636.158 kb on + strand at 5636.158 kb on + strand at 5636.159 kb on - strand at 5636.159 kb on - strand at 5636.159 kb on - strand at 5636.159 kb on - strand at 5636.184 kb on + strand at 5636.185 kb on - strand at 5636.185 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 5,633,951 + Psyr_4757 0.14 -1.4 5,633,951 + Psyr_4757 0.14 -0.3 5,633,951 + Psyr_4757 0.14 +0.6 5,633,951 + Psyr_4757 0.14 -1.7 5,633,951 + Psyr_4757 0.14 +1.3 5,633,951 + Psyr_4757 0.14 +0.8 5,633,951 + Psyr_4757 0.14 +0.6 5,633,951 + Psyr_4757 0.14 +0.7 5,633,951 + Psyr_4757 0.14 -2.3 5,633,951 + Psyr_4757 0.14 -0.3 5,633,951 + Psyr_4757 0.14 +0.8 5,633,951 + Psyr_4757 0.14 -0.3 5,633,951 + Psyr_4757 0.14 -0.0 5,633,952 - Psyr_4757 0.14 +0.2 5,633,952 - Psyr_4757 0.14 -0.3 5,633,952 - Psyr_4757 0.14 +0.3 5,633,952 - Psyr_4757 0.14 +0.8 5,633,952 - Psyr_4757 0.14 -0.7 5,633,952 - Psyr_4757 0.14 -0.6 5,633,952 - Psyr_4757 0.14 -0.1 5,633,952 - Psyr_4757 0.14 -0.3 5,633,952 - Psyr_4757 0.14 -1.0 5,633,952 - Psyr_4757 0.14 -0.4 5,633,955 + Psyr_4757 0.15 +1.5 5,633,955 + Psyr_4757 0.15 +1.5 5,633,955 + Psyr_4757 0.15 -0.3 5,633,955 + Psyr_4757 0.15 -0.5 5,633,955 + Psyr_4757 0.15 +2.2 5,633,955 + Psyr_4757 0.15 -0.0 5,633,955 + Psyr_4757 0.15 -0.9 5,633,956 - Psyr_4757 0.15 +1.1 5,633,956 - Psyr_4757 0.15 +0.1 5,633,962 + Psyr_4757 0.16 -0.5 5,633,962 + Psyr_4757 0.16 +0.0 5,633,962 + Psyr_4757 0.16 +1.1 5,634,124 + Psyr_4757 0.40 +0.2 5,634,125 - Psyr_4757 0.41 +0.7 5,634,265 + Psyr_4757 0.62 -1.5 5,634,265 + Psyr_4757 0.62 -0.7 5,634,266 - Psyr_4757 0.62 -1.8 5,634,385 + Psyr_4757 0.80 +0.8 5,634,389 - Psyr_4757 0.80 +1.7 5,634,389 - Psyr_4757 0.80 +2.2 5,634,389 - Psyr_4757 0.80 +0.4 5,634,389 - Psyr_4757 0.80 -2.1 5,634,413 + Psyr_4757 0.84 -0.9 5,634,443 + Psyr_4757 0.89 +0.5 5,634,536 + +0.6 5,634,536 + -0.0 5,634,536 + +2.8 5,634,536 + +0.5 5,634,536 + -0.6 5,634,536 + -0.5 5,634,536 + -1.1 5,634,537 - -0.8 5,634,537 - -0.3 5,634,537 - -0.6 5,634,537 - +0.7 5,634,537 - +1.0 5,634,537 - -0.5 5,634,537 - +0.4 5,634,537 - -1.1 5,634,537 - -2.1 5,634,537 - -0.2 5,634,537 - +0.8 5,634,537 - -0.5 5,634,611 + +0.4 5,634,611 + +0.1 5,634,611 + +0.4 5,634,611 + +0.3 5,634,611 + -0.6 5,634,612 - +0.8 5,634,612 - -0.8 5,634,612 - +0.1 5,634,612 - -0.2 5,634,612 - -0.2 5,634,612 - -1.1 5,634,700 - +0.1 5,634,714 - +1.7 5,634,714 - +0.7 5,634,744 + -0.9 5,634,796 - -0.9 5,635,365 - -1.3 5,635,428 + -0.0 5,635,727 + +0.5 5,635,728 - +0.8 5,635,958 + Psyr_4760 0.68 -0.3 5,636,090 + -0.9 5,636,090 + -0.8 5,636,090 + +0.3 5,636,090 + +0.3 5,636,090 + +0.3 5,636,090 + +0.8 5,636,090 + +0.5 5,636,090 + -1.0 5,636,091 - -0.1 5,636,091 - -0.9 5,636,091 - -2.1 5,636,091 - +0.6 5,636,091 - -1.1 5,636,094 + -0.3 5,636,094 + +0.7 5,636,094 + +0.0 5,636,095 - -1.4 5,636,108 + +0.2 5,636,108 + +0.7 5,636,108 + -0.3 5,636,108 + -0.2 5,636,109 - -1.2 5,636,109 - -1.5 5,636,109 - +1.2 5,636,110 + -1.5 5,636,110 + -0.3 5,636,110 + +0.4 5,636,110 + -1.2 5,636,111 - +0.0 5,636,111 - -0.3 5,636,111 - -0.7 5,636,111 - -0.7 5,636,111 - -0.2 5,636,111 - +1.3 5,636,128 - -0.8 5,636,158 + -0.0 5,636,158 + +1.1 5,636,158 + +1.5 5,636,158 + -1.5 5,636,158 + +0.3 5,636,159 - -0.5 5,636,159 - +0.3 5,636,159 - +0.9 5,636,159 - +0.7 5,636,184 + +1.3 5,636,185 - -0.0 5,636,185 - +0.0
Or see this region's nucleotide sequence