Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4468 and Psyr_4469 are separated by 302 nucleotides Psyr_4469 and Psyr_4470 are separated by 69 nucleotides Psyr_4470 and Psyr_4471 are separated by 1 nucleotides
Psyr_4468: Psyr_4468 - conserved hypothetical protein, at 5,329,262 to 5,329,684
_4468
Psyr_4469: Psyr_4469 - conserved hypothetical protein, at 5,329,987 to 5,330,574
_4469
Psyr_4470: Psyr_4470 - ABC transporter, at 5,330,644 to 5,331,354
_4470
Psyr_4471: Psyr_4471 - Protein of unknown function DUF214, at 5,331,356 to 5,332,621
_4471
Position (kb) 5330
5331
5332 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 5329.688 kb on + strand at 5329.688 kb on + strand at 5329.689 kb on - strand at 5329.689 kb on - strand at 5329.689 kb on - strand at 5329.689 kb on - strand at 5329.689 kb on - strand at 5329.689 kb on - strand at 5329.796 kb on + strand at 5329.824 kb on + strand at 5329.824 kb on + strand at 5329.825 kb on - strand at 5329.825 kb on - strand at 5329.828 kb on + strand at 5329.828 kb on + strand at 5329.828 kb on + strand at 5329.828 kb on + strand at 5329.828 kb on + strand at 5329.828 kb on + strand at 5329.828 kb on + strand at 5329.828 kb on + strand at 5329.829 kb on - strand at 5329.829 kb on - strand at 5329.829 kb on - strand at 5329.834 kb on + strand at 5329.834 kb on + strand at 5329.834 kb on + strand at 5329.835 kb on - strand at 5329.835 kb on - strand at 5329.942 kb on - strand at 5329.968 kb on + strand at 5329.986 kb on + strand at 5330.111 kb on + strand, within Psyr_4469 at 5330.414 kb on - strand, within Psyr_4469 at 5330.414 kb on - strand, within Psyr_4469 at 5330.504 kb on + strand, within Psyr_4469 at 5330.504 kb on + strand, within Psyr_4469 at 5330.505 kb on - strand, within Psyr_4469 at 5330.505 kb on - strand, within Psyr_4469 at 5330.589 kb on - strand at 5330.589 kb on - strand at 5330.589 kb on - strand at 5330.617 kb on - strand at 5330.905 kb on + strand, within Psyr_4470 at 5331.177 kb on + strand, within Psyr_4470 at 5331.177 kb on + strand, within Psyr_4470 at 5331.177 kb on + strand, within Psyr_4470 at 5331.177 kb on + strand, within Psyr_4470 at 5331.178 kb on - strand, within Psyr_4470 at 5331.178 kb on - strand, within Psyr_4470 at 5331.178 kb on - strand, within Psyr_4470 at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.359 kb on + strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.360 kb on - strand at 5331.560 kb on + strand, within Psyr_4471 at 5331.560 kb on + strand, within Psyr_4471 at 5331.561 kb on - strand, within Psyr_4471 at 5331.561 kb on - strand, within Psyr_4471 at 5331.710 kb on + strand, within Psyr_4471 at 5331.711 kb on - strand, within Psyr_4471 at 5331.711 kb on - strand, within Psyr_4471 at 5331.711 kb on - strand, within Psyr_4471 at 5331.723 kb on - strand, within Psyr_4471 at 5331.827 kb on + strand, within Psyr_4471 at 5331.827 kb on + strand, within Psyr_4471 at 5331.827 kb on + strand, within Psyr_4471 at 5331.827 kb on + strand, within Psyr_4471 at 5331.827 kb on + strand, within Psyr_4471 at 5331.828 kb on - strand, within Psyr_4471 at 5331.828 kb on - strand, within Psyr_4471 at 5331.828 kb on - strand, within Psyr_4471 at 5331.828 kb on - strand, within Psyr_4471 at 5331.958 kb on + strand, within Psyr_4471 at 5332.055 kb on - strand, within Psyr_4471 at 5332.055 kb on - strand, within Psyr_4471
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 5,329,688 + -3.9 5,329,688 + -0.6 5,329,689 - -2.5 5,329,689 - +0.2 5,329,689 - -0.7 5,329,689 - +0.1 5,329,689 - -0.3 5,329,689 - +1.0 5,329,796 + +1.0 5,329,824 + -0.2 5,329,824 + -1.3 5,329,825 - +0.5 5,329,825 - -0.9 5,329,828 + -0.9 5,329,828 + -1.6 5,329,828 + +0.3 5,329,828 + +0.8 5,329,828 + -1.6 5,329,828 + +0.4 5,329,828 + +0.9 5,329,828 + -2.5 5,329,829 - +0.2 5,329,829 - -0.3 5,329,829 - -0.8 5,329,834 + +1.5 5,329,834 + +2.3 5,329,834 + -2.3 5,329,835 - -0.1 5,329,835 - +0.5 5,329,942 - -0.4 5,329,968 + -1.2 5,329,986 + +0.1 5,330,111 + Psyr_4469 0.21 -2.7 5,330,414 - Psyr_4469 0.73 -1.8 5,330,414 - Psyr_4469 0.73 +1.8 5,330,504 + Psyr_4469 0.88 -0.3 5,330,504 + Psyr_4469 0.88 +0.8 5,330,505 - Psyr_4469 0.88 +0.3 5,330,505 - Psyr_4469 0.88 -0.3 5,330,589 - +1.0 5,330,589 - +0.2 5,330,589 - +0.3 5,330,617 - +1.0 5,330,905 + Psyr_4470 0.37 +0.5 5,331,177 + Psyr_4470 0.75 -0.5 5,331,177 + Psyr_4470 0.75 -1.8 5,331,177 + Psyr_4470 0.75 +0.6 5,331,177 + Psyr_4470 0.75 +1.8 5,331,178 - Psyr_4470 0.75 -1.6 5,331,178 - Psyr_4470 0.75 +0.2 5,331,178 - Psyr_4470 0.75 -1.9 5,331,359 + -1.7 5,331,359 + +0.6 5,331,359 + +0.2 5,331,359 + -0.4 5,331,359 + -0.8 5,331,359 + -0.4 5,331,359 + +0.7 5,331,359 + -0.2 5,331,359 + -0.1 5,331,359 + +0.5 5,331,359 + -0.7 5,331,359 + -1.5 5,331,359 + +4.0 5,331,359 + -0.8 5,331,359 + -0.5 5,331,359 + -0.5 5,331,359 + -2.0 5,331,359 + +0.8 5,331,359 + -1.4 5,331,359 + +0.7 5,331,359 + -0.1 5,331,359 + +2.3 5,331,360 - +0.5 5,331,360 - -0.4 5,331,360 - +0.7 5,331,360 - +0.2 5,331,360 - +0.1 5,331,360 - +1.2 5,331,360 - +0.7 5,331,360 - +1.3 5,331,360 - -0.4 5,331,360 - -0.9 5,331,360 - -0.3 5,331,360 - +0.3 5,331,360 - +0.7 5,331,360 - -0.6 5,331,360 - -0.5 5,331,360 - +1.5 5,331,360 - -0.0 5,331,360 - +0.2 5,331,360 - -0.4 5,331,560 + Psyr_4471 0.16 -2.0 5,331,560 + Psyr_4471 0.16 -0.4 5,331,561 - Psyr_4471 0.16 +0.9 5,331,561 - Psyr_4471 0.16 -0.6 5,331,710 + Psyr_4471 0.28 +1.1 5,331,711 - Psyr_4471 0.28 -0.8 5,331,711 - Psyr_4471 0.28 +0.4 5,331,711 - Psyr_4471 0.28 -0.9 5,331,723 - Psyr_4471 0.29 +1.6 5,331,827 + Psyr_4471 0.37 +0.3 5,331,827 + Psyr_4471 0.37 +0.4 5,331,827 + Psyr_4471 0.37 -0.5 5,331,827 + Psyr_4471 0.37 +0.3 5,331,827 + Psyr_4471 0.37 -0.2 5,331,828 - Psyr_4471 0.37 +1.0 5,331,828 - Psyr_4471 0.37 -0.7 5,331,828 - Psyr_4471 0.37 -0.7 5,331,828 - Psyr_4471 0.37 -0.8 5,331,958 + Psyr_4471 0.48 +0.5 5,332,055 - Psyr_4471 0.55 +0.1 5,332,055 - Psyr_4471 0.55 +2.8
Or see this region's nucleotide sequence